<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32823

Description Uncharacterized protein
SequenceAGGSSEPSSPSSSGGGEQVYVAVGESKAMVLWALHKFPKDTAFVLLHVCSQPKLIPIISADSKLWLRKLIPPMLFIVGARIPASQVQEQELTAYKKMELQRINDSLDQHLLLCAQEKVQAEKLVVESDDVAEGLVQLITEHHVTALVMGAAADKHYTKKAVPLSHGAMPQGAQKPDAQQFSVDRSTSLSDMWCVSNTWLHKPNLRRSDGNEKETVNEFDEADNKFQHMLRELESVRKQAYEDNCSREKAERELFEAFQKARASESMYFGEVKQKNQIEDKLKTTLEEVERLTETTNELCAKLQDERKKRLAMEKTTSHSDRIIKDLMLQHDKAVREVEALHAKKGESSGTSEGTMHITELSCSEINGATNNFDHSLKVGESVYGSVYKGFLRHTNVAVKKLNPESTQSQSQFNQEIEILSRVRHPNLVTLIGACKDAQALVYEYMPNGSLDDRLACKDNSKPLSWQLRTRIISDVCSALIFLHSNKPHSIVHSDLKASNILLDGNNVAKLSGFGVCRMFTDEFRGRTTLYKHTHPKGSFVYIDPEYVMTGDLTPLSDVYSFGIVLLRLLTGRPGFGLLKDVQRAVEKGCLEAILDSSAGGWPAMQAEQLARVGLKCCEIRRKNRPDLQTEVWTVLEPMLKSSSIILCSLSFKSVSEDLGGVPPYFICPILQDIMREPLIAADGFTYEAEAIREWIDNGHHTSPMTNLELLHCDLLPNHALRSAIQEWLQTNAN
Length733
PositionTail
OrganismTriticum urartu (Red wild einkorn) (Crithodium urartu)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.364
Instability index40.11
Isoelectric point6.12
Molecular weight81983.55
Publications
PubMed=23535596

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32823
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.19|      13|      32|      31|      44|       2
---------------------------------------------------------------------------
   31-   44 (20.98/16.87)	LWaLHKFPKDTAFV
   64-   76 (25.21/15.40)	LW.LRKLIPPMLFI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.94|      26|      33|     341|     366|       3
---------------------------------------------------------------------------
  341-  366 (44.70/29.78)	HA.KKGES..SGTSEGTMHITELSCSEIN
  374-  402 (32.25/19.50)	HSlKVGESvyGSVYKGFLRHTNVAVKKLN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.68|      18|      26|     270|     287|       5
---------------------------------------------------------------------------
  270-  287 (28.20/18.67)	EVKQKNQIEDKLKTTLEE
  297-  314 (29.48/19.83)	ELCAKLQDERKKRLAMEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.75|      16|      38|     492|     507|       6
---------------------------------------------------------------------------
  492-  507 (26.82/14.96)	HSDLKASNILLDGNNV
  532-  547 (30.93/18.17)	HTHPKGSFVYIDPEYV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.34|      11|      38|     211|     221|       7
---------------------------------------------------------------------------
  211-  221 (16.87/10.17)	EKETVNEFDEA
  250-  260 (17.48/10.80)	ERELFEAFQKA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32823 with Med32 domain of Kingdom Viridiplantae
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