<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32810

Description Uncharacterized protein
SequenceMTPGNPVCPAQFLRSVCEAILNCEHLHFNKQIFFCQSFELIHRVISQVDYKGVRDIIRFMIEKIHTIPIEANIAMLPQLDVMRKVLDYALNRNSSVLPAYLAFDEIKKKSDKWMHWKFADLFSAFVESFRPVAQMVSIINRSKLLPIVGYSSTLNQSWQLNAATAAFDLKGLLPYNNELTRPQIGLLRYVLEQPYSREMIYFMLSLTNKAKSRCPILEEQLVALIVLAMEKSENETNNQEETDYSQTQCLWQILSGHLITFIILNHISFPQLVRSLHESLAARNSKKGRDHLMWMLLQYISGSIQKTPLTDFLPFFKLHDLLYPEKDPLTGPDITKPICTHTFAISSIWIHLLKKAENEPQKVIRPIHVEFLHQTFMSTKALSSHLRILVDYLVNEFTNLCGTQNVTKYIDKLNDLIWKSHVITLDRLLLCLTLRAYEGNEAQVSLFFIQMLLLKRTDFSNRVADFVREMSPEHWKQSNWHRNHHALHIVRLFKKISMRFLVPPIQSLFFGTPPLFLCLLWKMILENDRINPIAYKILDRIGDEFTNLCGTQNVTKYIDKLNDLIWKSHVITLDRLLLCLTLRAYEGNEAQVSLFIIQMLLLKTTDFSNRVADFVREMSPEHWKQSNWHRNHHALHRKYPEKFYFEGHADISGQNMQHSYLPTYFSNICLRFIPVLDLIIHRYLELPPGSPSPLIDSLLEKYGCLDKFHDRPLTYLYETLHYYEHKMRERPTLRRKLVSIIIGAFKDIKPANWAVTDAYLNYMKRPVEDLAWNPELDYYYKLISRVVDTFQGKSPFPHVDWRFNEFANAGVHALHITCIELMALPVAANVVANNLIDLVVVGHKYIPRNTIEFWNNAIGVVLTALPEAYWSVINDRIISMMESPLLTYSPHPEPFQMMNFSDSHKSMSEMQPKQFFFIVHIVFAFYGFTLYTTDLLYHMKYHITGDSIKNDVEGKIRNLRPALQKRLRFITHLNITIIKTLLLIFRNM
Length988
PositionTail
OrganismTetranychus urticae (Two-spotted spider mite)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Chelicerata> Arachnida> Acari> Acariformes> Trombidiformes> Prostigmata> Eleutherengona> Raphignathae> Tetranychoidea> Tetranychidae> Tetranychus.
Aromaticity0.11
Grand average of hydropathy-0.074
Instability index44.30
Isoelectric point8.78
Molecular weight115612.47
Publications









Function






Annotated function


GO - Cellular Component
integral component of membrane	GO:0016021	IEA:UniProtKB-KW
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32810
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     496.92|     100|     147|     389|     488|       1
---------------------------------------------------------------------------
  318-  387 (89.54/56.42)	.................................................LHDLLYPEKDPLTG...PDITKPIC........THTFAISSIWI...HL.............LKKA..ENEPQKVIRPIHVEFLHQTFMSTKaLSSHLR...................
  389-  487 (196.97/133.95)	.................................................LVDYLVNEFTNLCG..TQNVTKYIDKLNDLIWKSHVITLDRLLL...CL.............TLRAYEGNEAQVSLFFIQMLLLKRTDFSNR.VADFVREMSPEHWKQSNWHRNHHAL
  488-  635 (178.70/120.77)	HivrlfkkismrflvppiqslffgtpplflcllwkmilendrinpiaykILDRIGDEFTNLCG..TQNVTKYIDKLNDLIWKSHVITLDRLLL...CL.............TLRAYEGNEAQVSLFIIQMLLLKTTDFSNR.VADFVREMSPEHWKQSNWHRNHHAL
  636-  724 (31.71/14.68)	H............................rkypekfyfeghadisgqnmQHSYLPTYFSNICLrfIPVLDLIIHRYLELPPGSPSPLIDSLLEkygCLdkfhdrpltylyeTLHYYE..................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.55|      17|     178|      97|     116|       2
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   76-   92 (28.69/16.82)	LP...QLDVMRKVLDYALNR
   97-  116 (27.86/25.11)	LPaylAFDEIKKKSDKWMHW
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32810 with Med23 domain of Kingdom Metazoa
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