<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32780

Description Uncharacterized protein
SequenceMVVATDVTPAADVVFVIEGTANLGAYLDQADGLKTNYIVPTLEYFNGGSSDDNEAGLDCNGTMYALVVFMAADCAPEPAVSCYAQTTSVNRVLSWLDQIPFVGGAGEGHSHIAEGLGTSLQVFDDFQAQREPSVTTQKHCILICNSPPYPLACVESQNYIGYMADQLATLMGERGINLTVISPRKIPALLKLYDKAGGDLQVMQTKNYAKDRRHLILLRGFQLQERPVSPSTLEPKAKPQPLPETKPPITADSPAMGANSHSVPSPQQPGGAKKRPAGGSPPNQPPFKQHVGMMGPQSAAPNQQQQQQQQQQQQQPQQPQQQQPTQSMITMHPPSQRSMMSNMPQQVIGRPGSFNSAPSSTSFLNQPNPPNVTINTKGPLPGMDSGGMGLPRPNQVQSPMGIRSSWPQGIAQPPQGMSHLLNQLKGPIANSGNAQMNMNRPMAPNMVPNQTIGQHSNAPQSGQGVQHNQPSTLQTQLSMANSMNTLPQSQANFSAPMTISSQQSQQSSAGPMTAMGGQAINAMGNQVIGQQAIGNPLQVSAQKERRSIWSGTLEWQEKAKALNDSSSKVTRAVPCQVLSYLCPSGETEVNADKWPKKLIMQLIPKQLVSSFGGLYLKNSRNVVFQFTSTNEALETLNKVMSNGFAGCVHFSNSQCDIRVMILLYAPEKRAYIGFIPNDQTGLVSAIRMAITSHKNKQVVKQQQQIIQQGTPNQGLPQQQSSPAPQGQAPNAAIYTSAGSTAPQQMQSMNTSSSQPGNQPGASTGGVLIAQSNQGASGGTTTINMNGGQAAGPPLSQLEAERVQNLLKIQQLQQTLEAAQQKELQFKTAQEQQQKSVMIHQHQHQHQRIMHAQPGAATNNPQLRHLLQQQQQAQQQAQQQAQQLRHQMMMQHRAQISAGGQMNPGNMPGNMISQSQQSMQNSGTGLFPDDGSFLDIP
Length936
PositionUnknown
OrganismStrigamia maritima (European centipede) (Geophilus maritimus)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Myriapoda> Chilopoda> Pleurostigmophora> Geophilomorpha> Linotaeniidae> Strigamia.
Aromaticity0.04
Grand average of hydropathy-0.564
Instability index60.03
Isoelectric point8.98
Molecular weight100847.63
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32780
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             8|     449.56|      49|      49|     375|     423|       1
---------------------------------------------------------------------------
  276-  326 (42.13/ 9.08)	.......P.............AGGsppnqppfkqhvgmMG.PQsaaPN.QQQ.....QQQQQQQQQQPQQPQQ....QQPTQ
  327-  366 (53.45/13.57)	SmiTMH.P..P.SQR......S.M..............MS.NM...PQ.QVIGR.......PGSFNSAPSSTS.....FLNQ
  375-  423 (96.08/30.48)	N..TKG.PL.P.GMD......SGG..............MGLPR...PN.QVQSPMGIRSSWPQGIAQPPQGMS....HLLNQ
  437-  469 (48.76/11.71)	N..MNR.PMaP.NM............................V...PN.Q...TIGQHSNAPQS....GQGVQ....H..NQ
  474-  518 (54.67/14.05)	Q..TQ...L...SMA......NSM..............NTLPQ...SQaNFSAPMTISSQQSQQSSAGP..MT....AMGGQ
  521-  564 (49.19/11.88)	N..AMGnQV.I.GQQ......AIG..................N...PL.QVSAQKERRSIWS.GTLE.WQEKA....KALND
  718-  773 (53.45/13.57)	Q..QSS.PA.PqGQApnaaiyTSA...............GSTA...PQ.QMQS.MNTSSSQPGN..QPGASTGgvliAQSNQ
  887-  924 (51.82/12.92)	M..MM..QH.R.AQI......SAG...............GQMN...PG.NMPGNM.ISQS..QQSMQ.NSGTG.........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.43|      24|      48|     810|     840|       2
---------------------------------------------------------------------------
  810-  840 (35.37/31.89)	QLQQTLEAAQQkelqfktAQE..QQQKSVMIHQ
  861-  886 (39.06/20.42)	QLRHLLQQQQQ.......AQQqaQQQAQQLRHQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     124.09|      39|      51|     151|     190|       4
---------------------------------------------------------------------------
  151-  190 (62.21/41.12)	LACVESQNYiGYMADQLATLMG....ERGINLTVISPRKIPALL
  200-  242 (61.88/36.64)	LQVMQTKNY.AKDRRHLILLRGfqlqERPVSPSTLEPKAKPQPL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     159.36|      49|      53|      30|      80|       7
---------------------------------------------------------------------------
   30-   80 (81.54/50.06)	ADGLKTNYIVPTLEY..FNGGSSDDNEAGLDCNGTmyALVVFMAADCAPEPAV
   84-  134 (77.82/41.77)	AQTTSVNRVLSWLDQipFVGGAGEGHSHIAEGLGT..SLQVFDDFQAQREPSV
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32780 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EAAQQKELQFKTAQEQQQKSVMIHQHQHQHQRIMHAQPGAATNNPQLRHLLQQQQQAQQQAQQQAQQLRHQMMMQHRAQISAGGQMNPGNMPGNMISQSQQSMQNSGTGLFPDDGSFLDIP
2) RGFQLQERPVSPSTLEPKAKPQPLPETKPPITADSPAMGANSHSVPSPQQPGGAKKRPAGGSPPNQPPFKQHVGMMGPQSAAPNQQQQQQQQQQQQQPQQPQQQQPTQSMITMHPPSQRSMMSNMPQQVIGRPGSFNSAPSSTSFLNQPNPPNVTINTKGPLPGMDSGGMGLPRPNQVQSPMGIRSSWPQGIAQPPQGMSHLLNQLKGPIANSGNAQMNMNRPMAPNMVPNQTIGQHSNAPQSGQGVQHNQPSTLQTQLSMANSMNTLPQSQANFSAPMTISSQQSQQSSAGPMTAMGGQAIN
3) VKQQQQIIQQGTPNQGLPQQQSSPAPQGQAPNAAIYTSAGSTAPQQMQSMNTSSSQPGNQPGASTGGVLIAQSNQGASGGTTTINMNGGQAAGPPLSQLEAERVQ
816
219
699
936
521
803










Molecular Recognition Features






MoRF SequenceStartStop




NANANA