<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32775

Description Uncharacterized protein
SequenceMSLEVQVNNFVQEVLKRESVEEAFICFIVDLPNKDQWKKQALEDYIKNLFSSIPQDSLPTALKYYVNAIASHSNPQRQKTLFSLLEHTIATNLVPARLVCESLLKCEKLQNQNKEFWCQSFQLIRRVIGGVDYKGVRDLLKVILEKAHGIPEQDNVCVLKELHALQTVVEYMFDRNACLLPSYFIINEIQKYYPDYKNWPHWRLSKLMSEFVDSFRHTAQMVSVIGRSKLLPVVGHSNAIGNVWKLEPTSLKFSLRGLLPYDKVKELQEPQTNLLRYVLEQPYSRDMVCSMLNLNKQHKQRCSVLEEQLVDLVVVAMERSENESEPTDDTGTSQLLWQHLSSQLIFFVLFQFASFPHMVVALHDKLAQRLLRKGRDHLMWLSDFLPMMKLYNLLYPDKEPLPEPDATKAISTHQMAVTCIWIHLSKKAQSEQVNLQRPFPHALDAHLEFLNQSLRNPSLSMSMGSDYSIALLCDAYSTNPEIFPRPMGALVETIYGNQKTQTSMPGPNCFANGPTQPLSMSFLDSLTVHAKMSLIHNIVTHVVKLAQTKSSLALAPALVETYSRLLVYMEIESLGIKSFISQLLPTVFKSHAWGILHTLLEMFSYRLHHIQPHYRVQLLSHLHSLAAVPQTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFQSEPKSLLSAESEELNRALVLTLARAMHVTGSESLSGTWCRDILSTIMQNTAHSWSSFTLVCFPPVLADFFQQYPVPKENKAQLKQRVEEEYRKWKSMTNENDIIAHFSLQGIPPLFLCLLWKMLLENDRINPIAYKVLERVGARALSAHLRTFADFLVFEFANSVGGQHVNKCIDALNDLIWKWNIITLDRLVLCLALRSFEGNEAQVCFFIIQLLLMKPNDFRNRVNEFVKENSPEHWKQSNWHEKHLAFHRKYAEKFYYESLQDHANQSCQHQYLPVYFGNVCLRFLPVFDIVIHRLLELPPVTKSLETLLDHLGGLYKFHDRPITYLYNTLHYYERKLTERPALKRKLISSIIGSLKDIRPKGWCLSEGYLTYMQRPAEDVSWIPEPEYYVRLVQRLVDIMSGKSSFPTTDWRFNEFPNPAAHALHVTCIELMALPSTGTVVGNALVDIILKGHMLFPRSSVESWMSTIGLVLTSLPDSYWVVVNDRIVEMMQSPALAVLNPTTDIFERLNFTFCHNTVSETPASYLLALTHAIWHHASIGQISVLPQFIKERLKTVIKTEEQFIYLCHLIGPFLQRFHTERTRCLMDLTVELYEILEIVDKSCEHMRYMDPICDLLYHIKYMFTGDTVKNEAERVIRNLRPALQMRLRFITRINIDEVPLS
Length1329
PositionTail
OrganismStrigamia maritima (European centipede) (Geophilus maritimus)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Myriapoda> Chilopoda> Pleurostigmophora> Geophilomorpha> Linotaeniidae> Strigamia.
Aromaticity0.10
Grand average of hydropathy-0.105
Instability index45.42
Isoelectric point7.20
Molecular weight153356.06
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32775
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     163.34|      54|      77|      33|      91|       1
---------------------------------------------------------------------------
   33-   91 (74.35/63.10)	NKDQWkKQALEdYIKNLFSSIPQDSLPTALKYYVNaiASHSNPQrQKTLFSLLE.HTIAT
  113-  167 (88.99/54.78)	NKEFW.CQSFQ.LIRRVIGGVDYKGVRDLLKVILE..KAHGIPE.QDNVCVLKElHALQT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     351.34|      68|     127|     551|     618|       2
---------------------------------------------------------------------------
  551-  618 (112.29/71.92)	SLALAPALVETYSRLLVYME....IESLG...IKSFISQLLPTVFK..SHAWGI..L..HTL...LEMFSYR.LHHIQP.HYRV......QL
  624-  673 (44.46/23.61)	SLAAVPQTNQTQLHLCVESTalrlITGLG...SAEVQPQL..SRFQ..SEPKSL..L..SA...............................
  675-  747 (84.12/51.86)	SEELNRALVLTLARAMHVTG....SESLS....GTWCRDILSTIMQntAHSWSS..F..T.....LVCFPPV.LADFFQ.QYPVpkenkaQL
  753-  807 (48.76/26.67)	.........EEYRKWKS.MT....NENDI...IAHFSLQGIPPLFL..CLLWKM..LleNDR...INPIAYKvLERVGA.............
  809-  879 (61.72/35.90)	..ALSAHL.RTFADFLVFEF....ANSVGgqhVNKCIDALNDLIWK.....WNIitL..DRLvlcLALRSFE.GNEAQVcFFII......QL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     412.09|     121|     571|     413|     543|       4
---------------------------------------------------------------------------
  413-  543 (197.93/178.14)	HQMAVTCIW..IHLSKKAQSEQVNLQRPFPHALDAHLeflnQSLRNPSLSMSMG.SDYS.iallcdAYSTNPEIFPRPMGALVETIYGNQKTQTS.MP...GPNCFANGPTQPLSMSFLDSLTVHAKMSLIHNIVTHVV
  933-  981 (27.98/ 9.88)	........................................................................................NQSCQHQyLPvyfGNVCLRFLPVFDIVIHRLLELPPVTK.SL.ETLLDHLG
  987- 1117 (186.18/143.17)	HDRPITYLYntLHYYERKLTERPALKRKLISSIIGSL....KDIRPKGWCLSEGyLTYMqrpaedvSWIPEPEYYVRLVQRLVDIMSGKSSFPTT.DW...RFNEFPNPAAHALHVTCIELMALPSTGTVVGNALVDII
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.81|      20|     109|    1167|    1186|       7
---------------------------------------------------------------------------
 1167- 1186 (36.80/23.26)	LNPTTDIFERLNFTFCHNTV
 1277- 1296 (38.02/24.29)	MDPICDLLYHIKYMFTGDTV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32775 with Med23 domain of Kingdom Metazoa
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