<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32766

Description Uncharacterized protein
SequenceMSTSYEKRGLKRPRVGPPDVYPQDPKQKEDELTAHNVKQGFSSALQITDEYGTARSSNITAAKIGTYFTAIIAKKHELNTFQDTGRKKQQINAKDNFWPVTPRSKNAIEAWFKDLAGSKPLTSLAKKVPIFNKKEEIFMTLYEYSVPMLRAAWFIKMTSAYTIAISEAKIKKRQLSDPSQEWTHTLTRFLREQLQKISDHYHSTNTITIGSTPSGDVELIIKQWHYCVQLVRSLYEEKLLDRQDFLTWVLELLEKNKSSDDVMLKLLMPLALQYVEEFAQCELLSRRLAYFCARKLCQMCTDSVAASPRTQSPLTTPNETRTQINTNNNSNYANPVVNAFIEFTNCPHHRNIVLGLSAMLQVITLDCPSALVWNDSGDGKAIAALQGSPLDLLPCAPSSLPMPPHANNPTIRSQLKMCEQQIRQRGRAAEVRWCSDKWQQSTASATISRVLTVLDVLDRHAFDKVDSTNSLETLYSKIFLPNNAKENEEPSGNDDCVVELLCEWGVCTQRNGDHRALVVAKLLEKRQNELTSERYTDSDVADEKDSISSTSMVSLGVPIFQNLLMKFLDTEAPTLDDSSSAESKAAFSNLVLLFSELIRHDVFSHDAYMCTLISRGTLVMHPSGTGAAIAMGMVNKPTTPELGLLDAKPESIKQDLLVDSRSIFDPMDSKPNTIKHEDHFDLKMELDDAKIDDDLDKLLQHIKQEQQNNIEQPDSVGSDKGEPTPLTSVTPLASTAPITNNDIQPVFGNCPSRHLLFVTHFPLSQDDSCSHDCNQRHVLLYGVGKGRDEARHAVKKVIKEIMKLFSKKCSMDVAEGGKVKKHPSKGEFNFETVMTRFQNLSYFDQHVVTISCMTSVIEMLNSFASGNSNYLPLVEHVSFLFDLMEVALNIHGLIEFCIQLLKELIEVESHLVFKSSNLISTYTTSLSLYAVGILRRYHCYLFVSQDDTAAAFEGLCKIVKHVTNPTDCSSAERCILGHLYDLYTMCTFLKSKHFEPFSNAYPKVKQTLYTSVHPSALNLLWNTSFMTEHINNAKEHIGIPKLKLDSQLVKQLNEVPANRYSFVCNAVVSICNTQDPDRLNEISILCSELTACCSALSSEWLGVLSALCCSSNHGCGFIDVLTQVDVVDLSIHDSLALFTSILIARHCFSLYDFVIEVAMPSLLAACPTVGGSTDPDAESGARLTCHLLLQIFKTVDSPQPCTYSSGMSPVSVSAQKPAYSLKYSCDRHLLAAAHHSISAGALVAVLKAILFLGDAAVGESKSVNETTKNNSGELSISNILGTIDDSEEYGMNVPVLVKPTGGGIESAGLSEFAKHALKQICSQEWVHEKCLKDPEQLCTQGFLVDHLLSNKQAQQLLHLICYPHSQQQIVEEQFDQKQMIMRILQNLDQWTLRVSILELQLMYKHCSQNSSELCQWLDNVAKMTIDIFQLQTDDHSKPVPGKSDVKNGLNSSTTKNSSNSNSIWLVAPLISKLHPSVQGRVLRAAGQVLESGNWSSKSKDKDRNVQRSTSLLSHQPFLSLVLTCLKGQDEQREGLLTSLHSQLSQFLHLSKDEKFHTDEPKVKQAMQDALQLRLSLVGGMFDTIQRSSSITMDWSVLLVQLISYGVVDTQTNSELFTTVLDMLAMLIHNTLVSDSSITEKNEETKKQYQNLIKKLKKELSDKNSDAINQVRQLLPLTKQQSEVIACEPMGSLIDTKGNKIAGFDSIDKKQGLQVSEKQKVSSWDMLEGHKNPAPLSWSWFGAIRMERKPLKYEEVHRLLQYHTHSMKKNTSYYLEPPPLPPEELYEPPQEKMMPWPVNTIKEEKEREIPMMDQSPRMGAAKKPKQTRQRKPRQRPPVMNQQMMNVQQSGIRQMGYGDQQMYQTNPHQNWYPQQQQQQQQQQQQQQQQQQQQQAAYYNQQSLPPGGPRFEQRHHLSQSKAALTNMLRARHPNAQYMTAPGNAPPQPPNRFPSLDIQMHKQRQMLRHQLRPQQNLQPNPGAIFPQHVQGNVNQSGPLHHVNQQGMAAGYGNYSTSIQQGTNTLVEQPSAAMMGTGFNQNYPGQNNMGVMPGMRGNQQSAFMGQQMPQRGIPQGQRPQYPINTMQAPNMTVNSMNTGATNMSQMGGYGRNLQGMQTSHMQQLRQQQQLMAMQQQVPASQQSLSQQQQTAQLVAHLQQQLQSGGHQGPPPQHPFHQQHQF
Length2176
PositionKinase
OrganismStrigamia maritima (European centipede) (Geophilus maritimus)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Myriapoda> Chilopoda> Pleurostigmophora> Geophilomorpha> Linotaeniidae> Strigamia.
Aromaticity0.07
Grand average of hydropathy-0.452
Instability index49.57
Isoelectric point6.87
Molecular weight244289.37
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32766
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     608.89|     193|     236|    1685|    1916|       1
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 1685- 1914 (314.62/236.80)	ACEPMGSLIDTKGNkiAG......FDSIDkkqgLQVsEKQKvsswDMLE....GHKNPAPLSWSWF.....GAIRmERKPLK..........YEEvhrllqYHThSMKKNTsyyleppplppEELYEPPQEKMMPWPVNTIKEEKERE..IPMM...DQSPRMGaakkpKQTRQRK.PR.QRP.........PVMNQQMMNVQQSGIRQM.GYGD..QQMyQTNPHQNWYPQQQ....QQQ....QQQQQQQQQQQQ.....QQQAAYYNQQSLPPGGPrFEQRHHL
 1927- 2176 (294.27/150.11)	ARHPNAQYMTAPGN..APpqppnrFPSLD....IQM.HKQR....QMLRhqlrPQQNLQPNPGAIFpqhvqGNVN.QSGPLHhvnqqgmaagYGN......YST.SIQQGT...........NTLVEQPSAAMMGTGFNQNYPGQNNMgvMPGMrgnQQSAFMG.....QQMPQRGiPQgQRPqypintmqaPNMTVNSMNTGATNMSQMgGYGRnlQGM.QTSHMQQLRQQQQlmamQQQvpasQQSLSQQQQTAQlvahlQQQLQSGGHQGPPPQHP.FHQQHQF
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     397.86|     128|     184|    1266|    1449|       2
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 1266- 1416 (204.11/244.20)	TTKNNSGELSIsnilgtiddseeygmnvpVLVKPTGGGIESAGLSEFAKHALKQICSQEWVHEKCLKD......PEQLCTQGFLVDHLLSNK.QAQQLLHLICYPHSQ.QQIV....EEQF..DQKQmIMRILQnlDQWTLRVSILelQLMYKHCSQNSSELCQW
 1453- 1594 (193.76/124.58)	TTKNSSNSNSI..................WLVAPLISKLHPSVQGRVLRAAGQVLESGNWSSKSKDKDrnvqrsTSLLSHQPFLSLVLTCLKgQDEQREGLLTSLHSQlSQFLhlskDEKFhtDEPK.VKQAMQ..DALQLRLSLV..GGMFDTIQRSSSITMDW
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     354.22|     114|     184|     465|     594|       3
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  465-  594 (166.91/149.61)	VDSTNSLETLYSKiflPNNAKENEepsgNDDCVVELlcewgvCTQRNGDHRALVVAKLLEKRQNELTSERYTDSDVADEKDSISSTSMVSLG.......VPIFQNLLMKFL..DTEAP.TLDDSSSAESKaafSNLVLLF
  658-  781 (187.32/124.77)	VDSRSIFDPMDSK...PNTIKHED....HFDLKMEL......DDAKIDDDLDKLLQHIKQEQQNNIEQPDSVGSDKGEPTPLTSVTPLASTApitnndiQPVFGNCPSRHLlfVTHFPlSQDDSCSHDCN...QRHVLLY
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     420.95|     142|     182|     818|     970|       4
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  818-  970 (228.56/223.23)	KVKK......HPSkgefnfetVMTRFQNLSYFDQHVVTISCMTSVIEM.LNSFASGNSNYLPlVEHVSFLFDLMEVALNIHG...LIEFCIqLLKELIEVESHLVFKSSNLISTYTTS........................LSLYaVGILRRYHC...YLFV.................SQD.DTAAAFEGLC....KIVKHVTNPTDC..SS
 1003- 1205 (192.39/156.68)	KVKQtlytsvHPS........ALNLLWNTSFMTEHINNAKEHIGIPKLkLDSQLVKQLNEVP.ANRYSFVCNAVVSICNTQDpdrLNEISI.LCSELTACCSALSSEWLGVLSALCCSsnhgcgfidvltqvdvvdlsihdsLALF.TSILIARHCfslYDFVievampsllaacptvggSTDpDAESGARLTChlllQIFKTVDSPQPCtySS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     125.31|      37|     240|     364|     400|       5
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  364-  400 (69.16/46.90)	TLDCPSALVWNDSGDGKAIA.ALQGSP....LDLLPCAPSSL
  611-  652 (56.15/36.49)	TLISRGTLVMHPSGTGAAIAmGMVNKPttpeLGLLDAKPESI
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32766 with Med12 domain of Kingdom Metazoa
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