<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32741

Description Uncharacterized protein
SequenceMVVASSEICALADVIFIIEGTAINGAYLNDIKTNYIIPTLEYFNQGNLEERDYVCESTSALYGIVVYHAADRLPSPSTDIYGPYSNPHKVLQMLDKIELVGGRGESHANVAEGLASSLICLDDLQQRREPGLAPQRHCILISNSPPYMMPVVENQAFTGNTAEQLASLLNENINVHLSILSPRKIPAMFKLFEKAGGDLSASQNKNYAKDPRHLVLLKGFSLKERPVSPTGAAHNINVASLSSPLPSHGSPMASGGPAPQPVQPVTGPAGTGVGVVTTGPPPTPVAGRGFPPAYGVRPGATSRWPMMPPQGPRYPGPGSALIEQLNRPPTAIPPHMNKFSPPSPLGLHVSLENSSVRRIFVFVYLEGEGMETGLNPVASTLSQQQTVQQQQTQQQAVQQQNQQAAAQQQVAASQQQQQLRMLGAQGVQGVPGVMGAPQQGIGGPQQAMPPSTQVMPQPNLLAQSQQMTPSTVMQQQQQQGTPLGQQQPQQSQVSQSDCQSVPFNRYYLVSICHNMSQQIYLVTYQILCNVEQLGRAINCSFKDRITIWQGILEYIDKKHPTDSQKLTRHVPCSVSTTARDGEPELKADLWPQKLIMQLMPKQLIGNIGGAYLKNSKSVLFHPQQCEALEALTKVMSTGF
Length639
PositionUnknown
OrganismRhodnius prolixus (Triatomid bug)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Paraneoptera> Hemiptera> Heteroptera> Panheteroptera> Cimicomorpha> Reduviidae> Triatominae> Rhodnius.
Aromaticity0.06
Grand average of hydropathy-0.309
Instability index59.80
Isoelectric point7.60
Molecular weight69227.14
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32741
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     119.39|      21|      22|     383|     403|       1
---------------------------------------------------------------------------
  383-  403 (41.38/16.76)	QQQ.....TVQQQQTQQ......QAV...QQ......QNQQ
  407-  439 (25.14/ 7.37)	QQQ.....VAASQQQQQlrmlgaQGV...QGvpgvmgAPQQ
  443-  459 (23.57/ 6.46)	GPQ.......QAMPPST......QVM...PQ......PN..
  463-  490 (29.29/ 9.77)	QSQqmtpsTVMQQQ.QQ......QGTplgQQ......QPQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     113.03|      22|      22|     238|     259|       2
---------------------------------------------------------------------------
  226-  250 (32.82/13.09)	PVSPTGAAHninVASLSSPLPSHG........S
  251-  273 (31.33/12.16)	PMASGGPAP.qpVQPVTGP.AGTG........V
  274-  304 (26.82/ 9.35)	GVVTTGPPP.tpVAGRGFP.PAYGvrpgatsrW
  336-  350 (22.07/ 6.39)	.MNKFSP.P........SPLGLHV........S
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     182.10|      47|     109|       4|      51|       3
---------------------------------------------------------------------------
    4-   51 (77.59/50.53)	ASSEICaLADVIFIIE.GTAIN.GAYLNDIKTNYIIPTLEYFNQ...GNLEER
   78-  107 (39.03/19.65)	..................TDIY.GPYSNPHKVLQMLDKIELVG....GRGESH
  115-  164 (65.48/38.13)	ASSLIC.LDDLQQRREpGLAPQrHCILISNSPPYMMPVVE..NQaftGNTAEQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32741 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GAAHNINVASLSSPLPSHGSPMASGGPAPQPVQPVTGPAGTGVGVVTTGPPPTPVAGRGFPPAYGVRPGATSRWPMMPPQGPRYPGPGSALIEQLNRPPTAIPPHMNKFSPPSPLGLHVS
2) GLNPVASTLSQQQTVQQQQTQQQAVQQQNQQAAAQQQVAASQQ
3) GVMGAPQQGIGGPQQAMPPSTQVMPQPNLLAQSQQMTPSTVMQQQQQQGTPLGQQQPQQSQVSQ
231
373
432
350
415
495










Molecular Recognition Features






MoRF SequenceStartStop




NANANA