<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32737

Description Uncharacterized protein
SequenceMSTEVQVSNVVNEIMKVESIEEAFSTFLVHKPSEKRTALLEELKNVFNGVHSEQEIGVKQFLVLASTMTNHSRLHCLFKLLENLVTSGVLPARLVCECILSSEKLTYQLENFWVECFTLIRNIISKVDYKGVREILKGCCEKAATLPGRLNSTVIHQMKALENVMNIIFDRNACLLPAYFIANEVQKGYPDGRNWPHWKLSEQMSSFVESFRQTAQMVSIIGHASMLPVVEHSGYADHLVNAWKLDPITLKLSLKGNLPYDKCLLEPQTPLLRYVLEQPYSREMVCSMLGLQKQHKQRCIALEEQLVELIMVAMERSSSGSSSSGPLSPSNNDDLTSTHWLWLHLSSQLIYFVLLQFASFPNIVMALHDKLSARDLRKGRDHLMWVLLQFISGSIQRNPLTNFLPVLKLYDLLYPEKEPLPVPDYNKPTCTHQMAVTCIWIHLLKKAQSDHLNLQRPVPNTLKVQHEFLQHLVVNNSNLCMGSDYRIALLCNAYSTNQEYFSRPMAALVDTILGAQKVIASGPTTPLSMSILDSLTVHAKMSLIHSIVTHVIKLAQSKSNMPLAPALVETYSRLLVYTEIESLGIKGFISQLLPTVFKYHAWGILYTLLEMFNYRIHHIQPHYRVQLLSHLHSLAAVPQTNQTQLHLCVESTALRLITGLGSGEVQPQLSRFLSEPKTLVSAESEELNRALVLTLARSMHVTGTGTDSASGAWCKELLNTIMQNTPHSWAQHTLQFFPPVLNDFFQQNSVPKENKQQLKKAVEEEYRNWASMNNENDIIAHFSVPGTPPLFLCLLWKMILETDRISPIAYKILERIGARALSAHLRKFCDYVIFQFTISEESQHVKKCADAISNMIWKYSIVTIDRLILCMALRMQEGNEAQICFFIIQLLLFKTTEFRKRVNEFVQENSPQHWKQSNWHEKHLAFHRKYPEKFSPEAPGSSSLQSLPVYFGNVCLRFLPVFDIVIHRFLELPPVTKTLETLLEHLGCLYKFHDRPVTYLYNTLHYYEKKLRDRPLLKRKLVSAVLGTMLDKTRGWNLSDAYISYMQQQPEGGLLWTPELDYYVKLIRRIVETMSSSAQYPTTNWRFNEFPNPAAHALYVTCVELMAVPVLPNVVANSLLDVITKGYTVIPSAQIQLWINSVGLVMAALPDSFWTVLQERLVDVLSCPKLTNWPYRNSPFQLFNFSTTHNSLLDNKFSYTLALAHAIWYHAGVGHLATLPQFVKEKLSPLIKTEEQLLFLCHLIGPFLHRFNTDRPKGVYELTIELYRCLEQVDKEVTQMNYMDPICDLLY
Length1291
PositionTail
OrganismRhodnius prolixus (Triatomid bug)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Paraneoptera> Hemiptera> Heteroptera> Panheteroptera> Cimicomorpha> Reduviidae> Triatominae> Rhodnius.
Aromaticity0.10
Grand average of hydropathy-0.045
Instability index45.15
Isoelectric point7.99
Molecular weight147818.04
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32737
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.55|      31|      70|    1117|    1153|       1
---------------------------------------------------------------------------
 1117- 1153 (39.97/45.56)	NSLLDviTK.GYTVIPSAQIqlWINS.VGLvMAALPdSF
 1190- 1222 (50.58/31.79)	NSLLD..NKfSYTLALAHAI..WYHAgVGH.LATLP.QF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     180.10|      47|      70|     544|     590|       2
---------------------------------------------------------------------------
  544-  590 (75.88/49.10)	IHSIVTHV.IKLAQSKSNMPLAPALVETYSRLLVYTEIESLGIKGFIS
  616-  662 (71.09/45.50)	IHHIQPHYrVQLLSHLHSLAAVPQTNQTQLHLCVESTALRL.ITGLGS
  673-  703 (33.13/16.97)	...........LSEPKT...LVSAESEELNRALVLTLARSMHVTG...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     186.24|      58|     295|     932|     990|       5
---------------------------------------------------------------------------
  932-  990 (99.97/62.43)	EKFSPEAPGSSSLQSLPVYFGNVCLRF...LP..VFDIVIHRFLELPPVTKTLeTLLEHLG..C..LY
 1225- 1291 (86.27/49.43)	EKLSPLIKTEEQLLFLCHLIGPFLHRFntdRPkgVYELTIELYRCLEQVDKEV.TQMNYMDpiCdlLY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     171.07|      52|     295|     417|     539|       7
---------------------------------------------------------------------------
  280-  336 (81.52/23.72)	YSREMVCSMLGLQKQHKQRCIAleeQLVELIMVAMERSSSGSSSsgPLSPSNNDDLT
  485-  536 (89.55/60.31)	YRIALLCNAYSTNQEYFSRPMA...ALVDTILGAQKVIASGPTT..PLSMSILDSLT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.70|      15|     767|     345|     362|       8
---------------------------------------------------------------------------
  345-  359 (25.25/24.01)	LSSQLIYFVLLQFAS
  378-  392 (28.45/14.86)	KGRDHLMWVLLQFIS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.28|      19|      35|       9|      29|       9
---------------------------------------------------------------------------
    9-   29 (26.35/24.41)	NVVNEIMKVESIeeAFSTFLV
   45-   63 (32.93/23.05)	NVFNGVHSEQEI..GVKQFLV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     179.26|      56|     295|     417|     478|      10
---------------------------------------------------------------------------
  417-  478 (86.51/69.99)	KEPLPVPDYNKPtctHQMAVTCiwIHLLKKAQSDHLNlQRPVP....NTLK..VQHEFLQHLVVNNSN
  715-  776 (92.75/55.30)	KELLNTIMQNTP...HSWAQHT..LQFFPPVLNDFFQ.QNSVPkenkQQLKkaVEEEYRNWASMNNEN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32737 with Med23 domain of Kingdom Metazoa
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