<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32735

Description Uncharacterized protein (Fragment)
SequenceAGCVHFTNLPPIPHCDLKVLILLYTPDKRAYLGFIPNDQTGFVDRLRKVIQQQKTTNALNRQAGGQAGQPAPGPPMVAPQPANPQTSMGGMLQQPPISQQQQTITSTLGAAVGSGGAQMMATMQQEQNQPQQQPQVTSQSGPFGSNHMVDARQENLVKIQRLRQNLEAAQQQELQYKQFEIMNQMKMQPLQDNMSMHGQAQEQYKAQLESSLGFQQEQQKLRAQLQLQQQQQQQQQVQQQLRGAMGGPGTATAAQPGQQRMMRPAISNNPGLRHLLQQPQYRLNMQQQMPRGAGTTVLQGQPGPQQQQFDDVSSYDFLN
Length319
PositionUnknown
OrganismRhodnius prolixus (Triatomid bug)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Paraneoptera> Hemiptera> Heteroptera> Panheteroptera> Cimicomorpha> Reduviidae> Triatominae> Rhodnius.
Aromaticity0.04
Grand average of hydropathy-0.835
Instability index65.43
Isoelectric point9.48
Molecular weight35453.64
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32735
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     304.68|      35|      45|     226|     260|       1
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   51-   85 (32.09/ 7.40)	...QQ..QKTTNALNRQA.GGQAGqpAPGpPMVAPQPANPQ
   91-  120 (37.63/10.11)	MLQQPpiSQQQQTITSTL..GAAV..GSG.GA......QMM
  125-  158 (52.02/17.16)	QEQNQ..PQQQPQVTSQ..SGPFG..SNH.MVDARQENLVK
  170-  193 (34.80/ 8.72)	QQQEL..QYKQFEIMNQM.K..M............QPLQDN
  195-  220 (34.75/ 8.70)	SM..H..GQAQEQYKAQL.ESSLG..........FQQEQQK
  226-  260 (65.98/24.01)	QLQQQ..QQQQQQVQQQL.RGAMG..GPG.TATAAQPGQQR
  274-  306 (47.40/14.90)	HLLQQ..PQYRLNMQQQMpRGA....G.T.TVLQGQPGPQQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32735 with Med25 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EQQKLRAQLQLQQQQQQQQQVQQQLRGAMGGPGTATAAQPGQQRMMRPAISNNPGLRHLLQQPQYRLNMQQQMPRGAGTTVLQGQPGPQQQQFDDVSSYDF
2) KQFEIMNQMKMQPLQDNMSMHGQAQEQYKAQLESSLG
3) VDRLRKVIQQQKTTNALNRQAGGQAGQPAPGPPMVAPQPANPQTSMGGMLQQPPISQQQQTITSTLGAAVGSGGAQMMATMQQEQNQPQQQPQVTSQSGPFGSNHMVDARQENLVKIQRLRQ
217
177
43
317
213
164










Molecular Recognition Features






MoRF SequenceStartStop




NANANA