<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32726

Description Uncharacterized protein
SequenceMGGDLMTVPSVGSPGSAAASPHPNSQLSQPSSVPPVDQLMSPRPPPSVPTNLQQPNTPLEHLLDKNTPAPTPTDQHDNKSITASPYIHQNPSIEAPLLAHLASGLCEPQPIPALIVGHEKDWLSVAPYAIHYWDKLLLEPYSYSKDIAFMVVCPDNEDVLANSKMYFKELSTTYEMCRLGRHTPMTKWNGFLPVNSGCILPNQQRTSLDDWFDSLPDRRFGEQLKMYAHALMRTGGNTGVNIGAPTSPQSHESSMTAEIKPPISPIKQEPGTESNGSTVTNEPATSNAAATILHDPMSEDDDINPPIIVVYLVEPFTYGNDSPDVQRVACLALLRSFSEMLNALPESIRGISLTGFGTAANIEHFLKSKDDKNRLPYKMFTP
Length382
PositionMiddle
OrganismMegaselia scalaris (Humpbacked fly) (Phora scalaris)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Platypezoidea> Phoridae> Megaseliini> Megaselia.
Aromaticity0.07
Grand average of hydropathy-0.396
Instability index59.60
Isoelectric point5.17
Molecular weight41715.67
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32726
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      88.74|      20|      20|      35|      54|       1
---------------------------------------------------------------------------
   14-   29 (27.00/10.29)	PGSAAASPHP....NSQLSQ
   35-   54 (38.11/17.43)	PVDQLMSPRPPPSVPTNLQQ
   58-   74 (23.63/ 8.13)	PLEHLLDKNTPAPTPTD...
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.83|      12|      16|     241|     252|       2
---------------------------------------------------------------------------
  241-  252 (22.70/11.94)	NIGAPTSPQSHE
  258-  269 (22.13/11.47)	EIKPPISPIKQE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     101.13|      32|     173|     119|     161|       3
---------------------------------------------------------------------------
  119-  161 (46.04/52.68)	EKDWLSvAPYAIHYwdklLLEPYSYSKDiafmvvCPDNEDV..LA
  299-  332 (55.09/32.53)	EDDDIN.PPIIVVY....LVEPFTYGND......SPDVQRVacLA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.90|      17|      22|     177|     193|       4
---------------------------------------------------------------------------
  177-  193 (35.66/21.81)	CRL..GRHTPMTKWNGFLP
  198-  216 (28.24/15.96)	CILpnQQRTSLDDWFDSLP
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32726 with Med13 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MGGDLMTVPSVGSPGSAAASPHPNSQLSQPSSVPPVDQLMSPRPPPSVPTNLQQPNTPLEHLLDKNTPAPTPTDQHDNKSITASPY
2) NTGVNIGAPTSPQSHESSMTAEIKPPISPIKQEPGTESNGSTVTNEPATSNAAATILHDPM
1
237
86
297










Molecular Recognition Features






MoRF SequenceStartStop




1) RLPYKMFT
374
381