<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32710

Description Uncharacterized protein
SequenceMLMTTELMHGHHSQSGIFGCSPAGHSGINQLGGVYVNGRPLPDSTRQKIVELAHSEQDRATFQEFYKFQMDVLVKYWEGIFIYYETGSIKPRAIGGSKPRVATTPVVQKIADYKRECPSIFAWEIRDRLLSEQVCNSDNIPSVSSINRVLRNLASQKEQQVQQQNESVYDKIRIFNGQSPGWTWYPTASTSNPIQNLQSNTNNIDSSSNPTVSVATAVAANSINMRDDIVKRDIFQAEISAHDNTSDASEHNSSTDEDSQIRLRLKRKLQRNRTSFTNEQIDNLEKEFERTHYPDVFARERLAEKIGLPRHVFRIRYLYVWFSNRRAKWRREEKLRTQRRSSEQPSGQSESNLHSLHHHNTSNISSTSSGNTPDPTPNGSQNILNDSNSNASSSNGETLQERLPSTDVGNDHPVENVHSSTTPRLPLNSGFNMYSSLPQPIADNYSSLTSTCLQQQRDSYAYMFHDPLSAYAVHARTTCNPTVAHQQTHITTYNNNPNNNSPSNTGMDLQVLTEKLANALNDNYDVTHMDTVISVIATLENSEITKEQLESTRLAKFINELRKKTTSDNLARRSKNLLKKWREMVCLRPQVEFADSNSNSNFPSLPNKKKRKKKSVSPTPFAVTEDLSLSNSSLSTPSLAVNEKTELTFAGRFTDATSQEKNVDGDPPPKKRGRKKGSCDLKLLSVATGGQKKIKTTQELLADIQGRKCIDLQESSTSSGSSESYTPENSNHLLPNGSFQLIEYSYSYPGNEIETEIEAIRAQIPPVSLNDIVDSNPSFPCTCFLKQIEVIKEDDQTKMESVDDNIEIKSIIKTQKNLKKVSTPITVKREAMKKSIFDFDYEEGNDPLDDILREVKQDVNDIDIKNIVNIPEINSTDTFRSDDKYVTTVKKESEEIIKLPPLPSFEIIEDENCPAKDFYVSRVAKITQNQIQSLHNFNIQNINGNMSENYIDRNTKPDRIVPQYNHLSFESIPKNLIGWNCDFKSKRKKVFTNGVFLGCKRAKNPPNQNEFRKIKIVNGSQKGFNISDGSDSRENSSPELLTDDSCSSLGDFHQVTSHLNAATPNRIVLTIKKTLNKRKSIENKENLYIEENLKFNGHTERTAMKSMLIKKRDLVSRILSLTDDLYLETKFPVLRCPSDETTTIFMAHEMSPLPKLLKVSEDFVVESAPAPASSSDTDYTDTESDTDMSENSNVSEASSEESDSSSNIELSNDVDIPINSVIVPESNISAVQESSENENFREWYETLQVRSYNNELLTILPYVIFD
Length1266
PositionUnknown
OrganismMegaselia scalaris (Humpbacked fly) (Phora scalaris)
KingdomMetazoa
LineageEukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota> Neoptera> Endopterygota> Diptera> Brachycera> Muscomorpha> Platypezoidea> Phoridae> Megaseliini> Megaselia.
Aromaticity0.07
Grand average of hydropathy-0.735
Instability index54.78
Isoelectric point5.82
Molecular weight142918.32
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
DNA binding	GO:0003677	IEA:UniProtKB-KW

GO - Biological Process
regulation of transcription, DNA-templated	GO:0006355	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32710
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.85|      21|      24|     363|     386|       1
---------------------------------------------------------------------------
  363-  386 (31.71/25.45)	NISStSSGNT.PDPTPngSQNILND
  390-  411 (34.14/16.02)	NASS.SNGETlQERLP..STDVGND
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     460.31|     150|     244|     181|     356|       2
---------------------------------------------------------------------------
  112-  172 (45.99/14.86)	............................................................................................................................................................DYKR.ECPSIFAweiRDRlLSEQVCNSDNIPSVSSI.....NRVLR.....NLASQKE..QQVQQQNESVYDKI
  181-  356 (228.53/183.18)	GWTWYptASTSNPI.QNLQSNTNNI.......................DSSSNPTV..........................SVATAVAANSINMRDDIVKRDIFQAEISAHDNTSDASEHNSSTdedsqiRLrlkrklqrnrTSFTNEqidnLEKEFERTHYPDVFA...RER.LAEKIGLPRHVFRIRYLyvwFSNRRAKWRREEKLRTQRRsSEQPSGQSESNLHSL
  430-  605 (185.80/105.77)	GFNMY..SSLPQPIaDNYSSLTSTClqqqrdsyaymfhdplsayavhaRTTCNPTVahqqthittynnnpnnnspsntgmdlQVLTEKLANALNDNYDVTHMDTVISVIATLENSEITKEQLEST......RL..........AKFINE....LRK...KT.TSDNLA...R.R.....................SKNLLKKWREMVCLRPQ...VEFADSNSNSNFPSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     101.34|      27|      28|    1181|    1207|       3
---------------------------------------------------------------------------
 1160- 1178 (21.24/ 9.67)	........SEDFVVESAP..APASSSDTD
 1181- 1207 (43.68/29.72)	DTESDTDMSENSNVSEAS..SEESDSSSN
 1209- 1237 (36.42/23.24)	ELSNDVDIPINSVIVPESniSAVQESSEN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     116.99|      28|      28|     734|     761|       4
---------------------------------------------------------------------------
  711-  731 (26.50/11.35)	.......DLQESSTSSGSSESYTP.ENSN
  734-  761 (47.41/26.34)	LPNGSF.QLIEYSYSYPGNEIETEIEAIR
  764-  792 (43.08/23.24)	IPPVSLnDIVDSNPSFPCTCFLKQIEVIK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      73.67|      26|      31|     861|     891|       5
---------------------------------------------------------------------------
  861-  891 (34.65/30.00)	DIdIKnivnIP.....EINSTDTFRSDDKYVTTVKK
  895-  925 (39.02/19.94)	EI.IK....LPplpsfEIIEDENCPAKDFYVSRVAK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.41|      21|      30|     656|     679|       7
---------------------------------------------------------------------------
  656-  679 (33.71/30.32)	ATSQEKNVDGDPP..PKKRGRKkgsC
  687-  709 (31.70/19.44)	ATGGQKKIKTTQEllADIQGRK...C
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.14|      19|      27|     942|     967|       8
---------------------------------------------------------------------------
  942-  960 (33.10/29.17)	INGNMSENYIDRNTKPDRI
  972-  990 (34.05/13.52)	IPKNLIGWNCDFKSKRKKV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.77|      36|     497|     612|     650|       9
---------------------------------------------------------------------------
  612-  650 (54.07/43.41)	KKKSVSPTPFAVTEDLSLSNS..SLSTPSlavNEKTELTFA
 1110- 1147 (55.70/36.84)	KKRDLVSRILSLTDDLYLETKfpVLRCPS...DETTTIFMA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32710 with Med26 domain of Kingdom Metazoa
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