<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32691

Description Uncharacterized protein
SequenceMVCEYNGNLTVAVRSIIVKAWKERWTEEQWSRAMQSYMIYVESSKTFNVLLEQVMISSSPNVHILQYLKHALFSKMATFASAMKSVVGYEDVSQTFCISTLLKFVEELFPHILSSSHPVDLQQIPDSWVQLLTWLYTIISRTLIKLSTDSKYSLEMAARVLKMSSALLDKIHSNEISRAYVALSLAPSDNSPSNRSQKLEASTNEISRLLSTPTYQQLSEELKTAISSCLKHDFNPNYPVGPPYIVDFTRQNLNVCVNVLITMEAYLYRVNDLQLLADKLIALETLQGLPRSVLYCEILRSSFLGLLDNDVIPEDIKWSSFIFLKIPQLFQKMVATSKKDSEDEQSELYQGLKLLLDSQSLFVSVDYKCKCSSSLQSLLNELVRYSLLSEASSKDIIFRRQKDWNASSCNTIIQSLTNEALFLIQKAEPTATTILKSLDITKNQDLLLNVMTQMMSGKSFELISSAAGAIGKLQNFVMKLIIVNESSKTATGETGKNSQTRAALFDISFLMLCHIVQFFGIEIISSCPEGSNSFFFQWATRCLPDKHDQFKLSSLQMNSDPFKVEFVLSQLTGPEFKTSLVKWNEMCCNSPQAIQESLVLWEYNIIDDELMRQILDSAKGTMCCLMVVIATWLCSLYNVSGEDRQQRCCKMLAQLLQPRNPSDSVVNFSERNQLAKEFVYYVADLTLPPSALSNIANMLQQKQQLNGNTTLPNHQPPFGKRFLLQQTQPQQYSHTIFTLKEKILACHELPKLFSQTLNSAYRKNSIGVRDLLHLKEIYRVAGSQWFITQMVKDITKLDKPEDVERLVCLYHSLCHLDMKSLTVNLIDKVIPNIMTSSCHLKSLMDPWGTGIAKLCTLNVATLYKMATRKVGVTDGDSSGSNDKKRPWNDSTSDDNMETPSKIKKEAASQDVNNKNYSSNAGAGFNALSLTDDFLFSDQREITPMNDSPPSSSTSPSSSFLDDLSDSLACMFLMFQPCVTGTLICPRTGFALAFIKESLKLDRDCAQFILHNLPSSMVPQLMRYLNSDITPHHIFTMVKRDSPSWKYTISRALHNYSHYKQQQLQL
Length1065
PositionTail
OrganismHelobdella robusta (Californian leech)
KingdomMetazoa
LineageEukaryota> Metazoa> Spiralia> Lophotrochozoa> Annelida> Clitellata> Hirudinea> Rhynchobdellida> Glossiphoniidae> Helobdella.
Aromaticity0.09
Grand average of hydropathy-0.144
Instability index50.08
Isoelectric point6.85
Molecular weight120485.37
Publications
PubMed=23254933

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IBA:GO_Central

GO - Biological Function
transcription coregulator activity	GO:0003712	IBA:GO_Central

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32691
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      52.85|      10|      22|     812|     821|       1
---------------------------------------------------------------------------
  812-  821 (20.33/15.58)	SLCHLDMKSL
  836-  843 (16.23/10.55)	SSCHL..KSL
  853-  862 (16.29/10.61)	KLCTLNVATL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.78|      11|      33|     174|     184|       2
---------------------------------------------------------------------------
  174-  184 (20.02/11.78)	NEISR.....AYVALS
  204-  219 (15.76/ 7.78)	NEISRllstpTYQQLS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.64|      16|      24|     686|     703|       3
---------------------------------------------------------------------------
  686-  703 (24.54/20.01)	TLP...PSALSNIanMLQQKQ
  710-  728 (26.10/14.45)	TLPnhqPPFGKRF..LLQQTQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      74.56|      23|      29|     525|     553|       4
---------------------------------------------------------------------------
  495-  508 (18.13/ 7.12)	........GKNS.....QTRA.....ALFDIS
  525-  553 (35.99/40.79)	SS...CPEGSNSfFFQWATRClpdkhDQFKLS
  568-  587 (20.44/ 7.37)	LSqltGPEFKTS.LVKWNEMC...........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.48|      11|      33|     601|     613|       6
---------------------------------------------------------------------------
  601-  613 (17.55/20.44)	W...EYNIIDDElmRQ
  632-  645 (16.94/10.43)	WlcsLYNVSGED..RQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.10|      27|      34|     329|     360|       7
---------------------------------------------------------------------------
  334-  360 (42.12/33.80)	VATSKKDSEDEQSELYQGLK..LLLDSQS
  365-  393 (37.99/14.79)	VDYKCKCSSSLQSLLNELVRysLLSEASS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.98|      18|      21|     397|     416|      10
---------------------------------------------------------------------------
  397-  416 (26.74/22.71)	IFRRQKdwNASSCNTIIQSL
  421-  438 (29.24/16.36)	LFLIQK..AEPTATTILKSL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32691 with Med24 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) TDGDSSGSNDKKRPWNDSTSDDNMETPSKIKKEAASQD
873
910










Molecular Recognition Features






MoRF SequenceStartStop




NANANA