<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32601
Description |
Mediator of RNA polymerase II transcription subunit 12 |
Sequence | MNSSAPSPGPSSRLYRSINSRDDLSQQRYVLRPPDDIHPLVDPARIGDSVYPDFYPWKRSTDEEDARMVDNLQKGYAEPPSVPHESQSAKKSIASLLRIKSNMTALSCFIITAMHIRVDTCRITTPGTFKPPPRVTLTDHKREAWLKDLANPAVPLRKLSRTIPHGIRNKVLLDQCCAKRIAPSRAVWFARCVGANELRGLKRKGHHQMGNMSEAIWLQEWTECVVDVLQRSSVAFLRAEGEPQARQTAKQNFAYMWVVGLLSDDNTKDTKAGSGVAPGTGASTTSKLSSVEKLPVAILIIRTFWKPLLTFPNLAKKLAQNLLAELSKLEADAHSDKPFYQPTIKALSTLVNALFDAQPDAFVMPSKWVQLGSTFEAIVSDSESTRVRNEALVISDTPKTRRTRNKQAVIISILDAARAPFDKTLFNQIVDTRADFGTIIQTILAWAVSDSRVSVERVFIASHLVSQLSEGVDGDAVPSHIVQFLLSVKSHLDVRIDDLYALVTELCVLDIFQPQDYVRSLISSGVLYISRLSEWANVQLDILGNLPLVAVPSSCQVQVRYMVRKVAKYASYNENELLERTNNALRVLLPGVFDSQAEDVDMSSSSSSLSDSTNIPYSEFTQNTRIVVAENLYTSLCAAVERGYVPTTQEFAQYQLILENLHAWRLMCASIQLIVPKCTQSHLLYFLASATRYQWQAFACIADMPALVKVFMHQYRGLRKVRVSRELWDLVQFSAQQLPELKPELETLLKNSSSPQLSPISEVTPQTDSEATKDVNLPQALNDLLLHSSDVRTSCKMLANYKDDSQFSNQLMTWLRDQEVSLQLLQTLVFLVVYECTCIEKVGDLFLQIHNLRDMSGGSRLLLSLIARDLTQEYSLSTTEAFSLQFQRKLFADQHPRIYLRLVAQYLFEREVFQDPQWLDDVDTFCKEVAVHHPALFSQLIVDPVIEPDNAVAASSLQQLLNHLLKLDLGTGTSLADDLQQLITHVTPFNMFLAQTQLRLLFAHRGRISKDPVAMDTSPELTINSTTPSTDTTDEDVSVLFRVLSDPGLLKLPPFFGDLFSELPGELKGRILARAETTFLTSPNFPRVGEDNIVSLLIELADSLADSVTEDVCKTQTFALSSGLQRLVEASVREPHPPGLAEGISMFLKIAMIHEKSLMASEDAEVTMLRNHVVEGLQALLDSPFVATTPDLKATLQDTWTALKSELSEVAEPANSAPSKAGPTRDLLLYSTANDAFSEVTVRSFDLLEESNPTMGVNDAALNLALFNATIEKRIPIAWNNGHKRQLVDGGRGGRKTARGTDSSLVPTILEGIPRCMDEYSNHWELFFCFYLYTMRASEVHDLRANRASSFERRASSVELLA |
Length | 1362 |
Position | Kinase |
Organism | Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Dipodascaceae> Yarrowia.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.133 |
Instability index | 45.18 |
Isoelectric point | 5.74 |
Molecular weight | 151976.75 |
Publications | PubMed=15229592
|
Function
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex (By similarity).
ECO:0000250
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GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
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GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP32601
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 92.35| 28| 29| 636| 664| 1
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636- 664 (47.10/32.84) LCAAVERgYVP.TTQEFAQYQLILENLHAW
667- 695 (45.25/26.58) MCASIQL.IVPkCTQSHLLYFLASATRYQW
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 136.45| 42| 461| 743| 788| 2
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743- 788 (65.16/45.49) PELETLLKNSSSPQLSPISEVTPQTDSEATKdvnlPQALNDLLLHS
1190- 1231 (71.30/41.12) PDLKATLQDTWTALKSELSEVAEPANSAPSK....AGPTRDLLLYS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 67.36| 23| 39| 939| 963| 4
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939- 963 (30.24/27.41) QLIVDpViEPDNA.VAASSLQQLLNH
981- 1004 (37.11/22.44) QLITH.V.TPFNMfLAQTQLRLLFAH
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.75| 18| 843| 12| 31| 9
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12- 31 (23.93/23.46) SRLYRSINSRdDLSQQrYVL
859- 876 (30.81/18.55) SRLLLSLIAR.DLTQE.YSL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.13| 13| 35| 1007| 1019| 10
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1007- 1019 (23.19/14.76) RISKDPVAMDTSP
1042- 1054 (22.95/14.51) RVLSDPGLLKLPP
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.17| 16| 38| 1078| 1093| 13
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1078- 1093 (29.03/17.97) TFLTSPNFPRVGEDNI
1117- 1132 (25.14/14.54) TFALSSGLQRLVEASV
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 295.90| 96| 237| 286| 387| 18
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286- 387 (141.93/111.30) SKLSsvEKLPVAILIIRTFwkPLLTFPNLAKKLAQNLLAELSKLEadAHSDKPFYQPTIKALSTLVNALFDAQPDAFVMPSKWVQLGSTFEAIVSD.SESTRV
530- 626 (153.96/101.09) SRLS..EWANVQLDILGNL..PLVAVPSSCQVQVRYMVRKVAKYA..SYNENELLERTNNALRVLLPGVFDSQAEDVDMSSSSSSLSDSTNIPYSEfTQNTRI
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