Description | Mediator of RNA polymerase II transcription subunit 12 |
Sequence | MLRSGAASASSGGGRGPSSSLSSVKRSKHDDTRLPEAYQQERPPWRPPLHPTAARRHVPDLFPTKSGQPEDDMSQISVRKGFAPRTYVHNEYFCAHDAIHTRLLSPDALDTLSDWMDEVMQRRRELDRASIATNQYKPPSRVTLNDAKLANYVKDLADPTVPLMRLSRSVPHGFRGEKLFEMLWVGGALPSTATAATTTVNYFHSRIAGPPSASSASASASASASTSAPRKSVDIPRAVWFIRALGAAELSSLRNKSAATIIPEITSNLCAWMAKQVAELNLVHTAESNSTATASPAPVSPSTHLPRTPSAAPSSLSRSVAAAHFARTPSNLNPASSPSLAPAKEVCYVLQNDADEERWIAKWSYSLSLARHLHAQNLLDRSVLVRWIVDAFSASNLVQLPFLLELVQEVLLLVLRRRCFVKPFLTALLVQIPNVDARLDPSSSGGLRTKLVLLFRIVCENSPESLISPRLWFEHSASLTQLLNELNAETPLPLSHQAFEFVEQTVRPRVDRLLLRPHSGNTTQNASLETQETLSSPLQHHLDIQALDSFDMTTIDRVFLQNTSATHRYAKHDRDDTVWATRIDTILTWACTDRRSGVVRQYLAATLIEKIRFGVPWEESSEETDQVSLPAFDLEHNTTKTRKINVEPMLIKWLGDVETSLNQKLDESSTQTRVSLLATVDVGAIVVLLGELARRGVFSYTKYLQRLIARGMTAPSASSATEQHQNPDGSVQTPSSVSASRDSLHLRLLRSLPLYDQPASVYQQRRQAIYGDRTKETYEDAAQRRALRQLQSFLPFAFAQEVQAEASRIAVSPSPSTPDPVHALSRLWSASRFVRCRLFRSELLPAVTARVERLNGDQLSQISAVLVMADDFEGLAQLLATLLLRPLSDNLARAAFNMVIEYSLVWRSMDIMATLNQLVRQQLNHSSSIRNDRQAVMASTTLLRLRTLIENVPSRISASALDPGADHDALQQHVQALRPNVDALLDRFAKLTRSSVESDGSIASSSTPVEGSDMLTPFRSLFVQPDAMSDEMIERTIVDSVFARSDTSLVPSAVRLIDQLYLEASLEIDERHARWLSNLVLSIEQGTHSDASMKALLSLLTRLIAHGTLNLQLAMDTFLLPYLLSSVRRLTDPATRNTEVPMHIGSIVSSLGEIFASSLGETVPATSYEDMRAFGAQTKLLFAQVNLPSLLRAATCLISAFDETSTVPASEKAQIESFCNALLQSQPMQIAFRQEPRLCILAIKDTCKSMWGCNPSRVIDLAMACLDPTSLLLRDVGTIDAASVKNRLDGWDTAVVATELVEIFERLQLVESSFQTRADSKTKALASGIFDDLFVQLPDIGAQLVRDCQSSGLVSRFTDIGIKILSDKVKAASTDADKTPRRMDNSHKGMTNFGPDDGADAPAQAKTAADAAKHGPCVGEQQVESTLRSVVRMCEQQHSFIFNATDADSCAQLLLHVVTSLEDALGSMAAASHQDKVARLVTVLHGSMTFQLMHLVLRFGCLWNGTMRALALRLVKALLELTRQAGEKTECGGSFALLLDSLSFVLDELPPTLLSTCLPELETQLQTIELATQERSDKLQQLSFRLDNATTANAWLVASSAGAALKKGWFTSGGLNPWECAEYLEAPPAANPAAAGAAGAAGAAAGGNARAGVVETGRSGVNSRAAVESPGAVTVNDAETCNSLPGARTGWTGKLWLNTAIPLSMLGVRVTRDLVPNYASPASPGGVSVGSNDASSQPWTTGGGASAIGVGTCSAMDMDAKEALAALPMFVESERTYGERSAGEPAYSRDLRRGLLVEPNLPCRTRDERGETSQEPARATMDPAGAHTSVTSSATHDPSHVIDLTWDADEEMPLSTHPHHPAVATTSRKRRLSKRD |
Length | 1876 |
Position | Kinase |
Organism | Ustilago maydis (strain 521 / FGSC 9021) (Corn smut fungus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Basidiomycota> Ustilaginomycotina> Ustilaginomycetes> Ustilaginales> Ustilaginaceae> Ustilago. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.173 |
Instability index | 48.14 |
Isoelectric point | 6.23 |
Molecular weight | 204263.12 |
Publications | PubMed=17080091 |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex (By similarity).
ECO:0000250 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP32600 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 906.42| 333| 367| 415| 780| 1 --------------------------------------------------------------------------- 415- 778 (495.19/366.16) LRR.RCFVkPFLTALLVQIPNVDARLDPSSSGGlrTKLVLLFRIVcenSPESLISPRLW.FEHSASLTQLLNELNAETPLPLS.........HQAFEFVEQTVRPRVDRLLLRPHSGNTTQNASLETQETLSS...PLQ........HHLDIQAlDS.....FDMTTIDRVFlqntsathryAKHDRDDTVWATR.IDTILTWAC..TDRRSGvvrQYLaATLIEKIRFGVPWEESSEETdqVSLPAFDLEHNTTKTrKINVEPMLIKWLgdvETSLNQKLDESSTQTRVSL.LATV..DVGAIVV.LLGE....LARRGVFSYTKYLQRLIARgMTAPS.ASSATEQHQNPDGSVQTPSSVSASRDSLHLRLLRSLPLydQPAsVYQQRRQAIYG..DRTKETY 787- 895 (61.30/21.65) LRQlQSFL.PFAFAQEVQAEASRIAVSPSPSTP..DPVHALSRLW...SASRFVRCRLFrSELLPAVTARVERLNGDQLSQIS....avlvmADDFEGLAQLLAT....LLLRPLSDNLARAA.......................................................................................................................................................................................................................................................................................... 944- 1251 (349.92/197.86) .....................................................................RLRTLIENVPSRISasaldpgadHDALQQHVQALRPNVDALLDRFAK...LTRSSVESDGSIASsstPVEgsdmltpfRSLFVQP.DAmsdemIERTIVDSVF..........ARSDTSLVPSAVRlIDQLYLEASleIDERHA...RWL.SNLVLSIEQGTHSDASMKAL..LSLLTRLIAHGTLNL.QLAMDTFLLPYL...LSSVRRLTDPATRNTEVPMhIGSIvsSLGEIFAsSLGEtvpaTSYEDMRAFGAQTKLLFAQ.VNLPSlLRAATCLISAFDETSTVPASEKAQIESFCNALLQSQPM..QIA.FRQEPRLCILAikDTCKSMW --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 165.38| 51| 1107| 158| 252| 2 --------------------------------------------------------------------------- 181- 232 (82.85/58.51) EMLWVGGALP.STATAATTTVNYfHSRIAGPPSASSASASASASASTSAPRKS 279- 330 (82.53/49.02) ELNLVHTAESnSTATASPAPVSP.STHLPRTPSAAPSSLSRSVAAAHFARTPS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 81.30| 24| 581| 1254| 1292| 3 --------------------------------------------------------------------------- 1254- 1277 (41.30/43.61) NPSRVIDLAMACLDPTSLLLRDVG 1318- 1341 (39.99/14.45) ADSKTKALASGIFDDLFVQLPDIG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 48.24| 13| 1530| 139| 151| 7 --------------------------------------------------------------------------- 139- 151 (23.13/10.83) PSRVTLNDAKLAN 1670- 1682 (25.11/12.27) PGAVTVNDAETCN --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 33.22| 9| 14| 1785| 1794| 8 --------------------------------------------------------------------------- 1785- 1794 (13.89/11.98) PAYSRDlRRG 1802- 1810 (19.33/11.48) PCRTRD.ERG --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) DLTWDADE 2) LPEAY 3) MLRSGAASA 4) SLSSVKRSKH 5) TSRKRRLSK | 1843 34 1 20 1866 | 1850 38 9 29 1874 |
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