Description | Mediator of RNA polymerase II transcription subunit 12 |
Sequence | MIPHSSAGVQSWGHPLRAVNNGSGHVDASQAVGPPDPQFEKLPTPVPQPQPRQPAVIDLTTSGGDAQELEPPPKRLRLDLPAAPSARDASPAPGSGGELRSTPGTGGSKPPSLSWRNRPVWSFQAMLSEVPGSNVMNEEDATAVAQGGKPASPPSLPVLPWKYIPESLGSNPTTSRASSPVKEVQTIPYRIETPSVAPVLKGEKVADFSPWIGNHPEDVLNEQTAKQGHYDRTQVSQNESNTARPSLYAQLKHRSGLQMLSSVFAAALEKRQNHSLVTAPSTFKPPPRVTLTDNKREAWLRDLANPSVPLRKLSRTIPHGIRGKALLDQCLNKGIPVNRAVWLAKCVGANEIRAFKRKGTSGTLALGLEAKWVRDWTASVQQFLEGVLGACGSAQWKMKMTYAVSLTARLFFERLLDHDQYLGWFLSSLEAAPVNIVPVWLLMLGIYWDNIMRYRKRGRRLAELLLVKLRQVTQPDKGGPLQPLVDRLSLYVRRLVLEHTSSVVLPGSWENHKELISSCLNLKDNVHKTIYQNLSERNSRLQLPKNHQDTAERSPQQRVIQLFDSIRSAHDISSASTACLKTIEDKAILISKLLEWTATPFRYGLCRVYTGVRLLRKWKMSGIDVDSYILSFLADVRVTSALNMENIYHIISELVRSQTFSVGRYLQWLMAKGVTNTPQPVPSDLCLLKQLPANRLPEHVRNLRNTLLYRAGIPVMEEDSAIAELKISIAQRLPNIFGAEMDSAMPTESSQPHPTWAVKSEIGQWIRHGIAGHCRDSPRYVYLLSRSTAPANNYRKLSGVSVAVDPGASALTPDEFYSVREILETFGDLSMLADILKQATRCDDDVVLASVADTVNCHFDCFCVIGATADLFRGLVESYARLKRLGNASLDLLFSLIELGLRIPSEFNTVALLRQDLTRLENKSALAAPSPLSDSIPLALSDVDPSFQEKLNQLLSSGGGMDESTMDTVFYSLMHILENSGSPAKLSANETARYLAYLRPFQPKHFDTMLIRWICGLLKSSTPSMSRILPPLIGVGCVTIHAFVFLVKKLLQSEKVAAVIPNLAGLRVDLLQLLVPLVSGKSKYADLVTYRFHVAQQEFFMKHPQETLDIICDAVALVNSETGSNPGQPDIAGCATELLDILLTQNPEVTVQYCLQGFIGKHSTSTTVLERALDNLLGFDSLAGPPTMSEAEKVVRMTDDFSLPFCQLKLQMLFNAESGRNVGNGIVDVMFKAAVEDTRSKGSNWVGFVGLMSQDIIRQVWKHHYHYKNLEAHGHPGTAKSLETAKLYLTIIEKLAYSVPEAGVQSVAPILVEKMDLLLHRLVIMQTNFNNVTMNRHGAATTQILQSRSNFERSLAFWFSAFLRMIVIHRSAFTMPSPAPRANGLQEQSRLLISILCISLARLPDSVIRLFPAADYFPHPIPSQGYRPCPGILLQTHALDVAASLIDTFPDEARQQCARFLKEKCPPFLQYQNDSRFIYLLGPMSDAAALNSLQAASLPSPAAGGSTPTPTPSSALPGAPSNPQPTAMTPAVTSASLSEGINCVASHLRLQYRGRAMGPYPVRPWELLEDAAPIVGVNDTAVNLKYFDARRVRA |
Length | 1594 |
Position | Kinase |
Organism | Aspergillus oryzae (strain ATCC 42149 / RIB 40) (Yellow koji mold) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus> Aspergillus subgen. Circumdati. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.143 |
Instability index | 50.32 |
Isoelectric point | 8.87 |
Molecular weight | 175555.72 |
Publications | PubMed=16372010 |
Annotated function |
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex (By similarity).
ECO:0000250 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP32588 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 80.01| 23| 96| 667| 703| 1 --------------------------------------------------------------------------- 671- 697 (35.35/28.55) AKGvtNTPQPVPSDlcLLKQLPANRLP 1503- 1525 (44.66/15.30) AGG..STPTPTPSS..ALPGAPSNPQP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 84.61| 25| 314| 1045| 1104| 3 --------------------------------------------------------------------------- 196- 220 (45.41/12.04) VAPVLKGEKVADFSPWIGNHPEDVL 1047- 1071 (39.20/62.79) VKKLLQSEKVAAVIPNLAGLRVDLL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 43.94| 13| 317| 119| 136| 4 --------------------------------------------------------------------------- 119- 134 (21.59/24.18) PV..WSFqamLSEVPGSN 157- 171 (22.35/ 7.59) PVlpWKY...IPESLGSN --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 146.45| 49| 315| 393| 498| 5 --------------------------------------------------------------------------- 395- 465 (72.67/109.24) QWKMKmtyavsltarlfferlLDHDQYLGWFLssleaAPVNIVPVwLLMLGIY..WDNIMRYR..KRGRRLAELL 617- 670 (73.78/23.91) KWKMS...............gIDVDSYILSFL.....ADVRVTSA.LNMENIYhiISELVRSQtfSVGRYLQWLM --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 214.61| 53| 702| 42| 110| 7 --------------------------------------------------------------------------- 42- 94 (95.11/39.79) LPTPVPQPQPRQPAV...IDLTTSGGD...AQELEPPPK.RLRLDLPAAP..SARDASPAPG 745- 793 (82.03/32.50) MPTESSQPHPTW.AVkseIGQWIRHGI...AGHCRDSPR.YVYL........LSRSTAPANN 1530- 1573 (37.47/ 9.90) ............PAV...TSASLSEGIncvASHLRLQYRgRAMGPYPVRPweLLEDAAP... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 262.13| 80| 455| 504| 583| 8 --------------------------------------------------------------------------- 504- 583 (136.70/88.77) VLPGSWENHKELISSCLNLKDNVHKTIYQNLSE..RNSRLQLPKNHQDTAERSPQQRVIQ..LFDS..IRSAHDISSASTACLKTI 943- 1028 (125.43/80.79) VDPSFQEKLNQLLSSGGGMDESTMDTVFYSLMHilENSGSPAKLSANETARYLAYLRPFQpkHFDTmlIRWICGLLKSSTPSMSRI --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 57.50| 19| 702| 716| 735| 9 --------------------------------------------------------------------------- 716- 735 (28.63/21.80) MEEDS..AIAELKISIAqRLPN 1385- 1405 (28.87/16.86) LQEQSrlLISILCISLA.RLPD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 60.08| 17| 89| 140| 156| 17 --------------------------------------------------------------------------- 140- 156 (30.30/18.53) DATAVAQGGKPASPPSL 231- 247 (29.77/18.06) DRTQVSQNESNTARPSL --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ELEPPPKRLRLDLP 2) LPWKYIP | 68 159 | 81 165 |
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