<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32533

Description Uncharacterized protein
SequenceMNPAGQMPPGMMAGMGMAGGPAAQGGGQAAMAAVMAKLKSQPPPTVGWQAEIPTADRWKIINQIASSLRLVQSELDGPRAVKMAEAFEEHTFRTASSKDEYIGACRGKMQQIQETRMRKQADTDQLMRDQQFLNRNPQLAQQQQQQLLLARMQAGQMGGPQNPQQSGMGPGMMPPNINIAAAMANNPALQAQMAMAAQAQPGLLQQQQQQQQQQQQQQQQQQQQQQAAAAAAQQQAQQNQLSQLPPNHPLNQYRNMPKEQAIEHLAKTMMQQAQPQHIQHIMSQLGVLSEEQKAQCERLKITPVEMFFRNAAAKKLLQSHVITAGGMQGMPGAGGVPGGMSTGPGGTPQLNAQQIANQQIHSRQAQLAAAQAQQARILQAQAGLGRGQNIGQPPPFDNNLFMNDIQSYLKQQQQQQQQQSGNAQVDAMAAAKKAAAAVAAQQGRGMSNAAGMPTSMAPQGTPQLSAAAAQQQQQQQQQQQHQQLLLLRQQAAAAQQRLNQQQSPPQPPNQPSLVGQHPSPTMNLLNQSHRPASATGSQAAQAAQAQQQLQQARLAELQARNQLQQQQQAQHQQQQAGMAQRPPGNFTIPPGFPIHKFQNMPPEQLQQAIHNFNKQAQVQQALAQQQQQQGQNPAVLLQQQQAALNAQNAMRNGMAGNQASQIQAAQNALLQQQLNNPGMTAELAQKIQQQKMMNLHMQQGALAQKLAAQSVKPQQPGQQAQNAAQQPQQQQQQQQAQTVQPPQPGRPQLPFIPDIPFPPAFDGMKYPPNAVAFLKKHFPQLEIPVNNLPNWGTFKDWAKQVSVDVAMRVRQLHFLHIQEMAKKNAFVGAMQIQYQEFVTRLGNSRSAHLQQAQMQAAHAQAQAREAQQAAAPHMSPPKPAVKQPTPSQTQAPTPKMAQQSVTPNQQQQQQQQQQQQQQQQRSLKRPAEESASSQVTQSQAQAQAQAQAQQQAQQQAQQQAQQQAQQQAQQQQQQQQGQKAGDWQSFLQKLLVMPPEMQQQLLNQPRMAQLPPERKAEITRVIQLSRTKLQNAQNQQRSAAMQAQLAAQNQNQAQNQNQTQVKQEPQQPARPPTAQQPPQQKPQAAAPAAPGPQAAAPTAPIDPAKHLLKNKEQVQLIRQEETQRALARPIIPMSNEVKAVMKQALKESSQALLRMEQWMPMFLMLLPAERIVRELFQTRATVATQYEDPQFQNTKDNFTITPEDLEAAKSQINRYFNYVKAQVPKLNEQRIKQGQPPIPMSATMPSNLQQQQQHQLLQQRQALQQQQAQQQHQQNLNQQAAAKAPVPNLGQVEFQKQQQQQQQDLKHPAAALQQPAQQVGKSGAPAAPTPPIPTAASFPLHIPPRKKPKSGPESPNISKAPKPDLKLTPTQLQAQAAAAAAAQAPAMPAPPVANQAAPKGNLPLEYTHLCIVKTCEYNTRGFANQAELLRHLKEDHKDDINRGSKQPPPDPRAQREKEARMIEERNKMITNPLEYTLGSVAEALNLNRDGTRKIKEEKPDDKEATASVKAPTPKTTGSTPLAKTPSKAAPPTPKLDTKEAAEKSAAGLPTPPSLGWDDTMISPTVIHQAFEGLEEITDLVIDSIDISMILTPDDSDDLFSDDLKIPGISPPLPSNALPEARNGGDAMDMNEDEMKDFEGWNPFGIRNCGPIGLVEDIDWELVDLPGTGPNSGNSSTLSGWDNSFFELRA
Length1689
PositionTail
OrganismDactylellina haptotyla (strain CBS 200.50) (Nematode-trapping fungus) (Monacrosporium haptotylum)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Orbiliomycetes> Orbiliales> Orbiliaceae> Dactylellina.
Aromaticity0.03
Grand average of hydropathy-0.841
Instability index65.54
Isoelectric point9.55
Molecular weight185372.84
Publications
PubMed=24244185

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32533
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|    1662.53|     260|     260|     130|     389|       1
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  130-  389 (465.17/75.57)	QQFLNR.NPQLAQQ.....QQQQ......L........LLARMQ.AGQMGGPQ....................................NP..QQSGMGPGM...MPPNINIAAAMANNPALQAQM..A..MAAQA.QPGLLQQQQQQQQQQQQQQQQQQ...QQQQAAAAAA.........QQQAQQNQLSQLP..PNHP...LNQYR..NM..PK....EQAIE.....HLAKTMMQQAQPQHIQHIM.S.QLGVLSEEQ...........KAQCE...RLKITPVEMFFRNAAAKKLLQSHVITAGGMQGMPGAGGVPGGMSTGP.GGTP.....QL..NAQQIANQQIH..SRQAQLAAAQ.....AQQARILQA..QAGLGRGQN
  399-  634 (299.33/44.80)	NLFMNDiQSYLKQQ.....QQQQqqqsgnA........QVDAMA.AAKKAAAA....................................VA..AQQGRG................MSN..A..AGMptS..MAPQG.TPQLSAAAAQQQQQQQQQQQHQQlllLRQQAAAAQ..........QRLNQQQSPPQ.P..PNQP..sLVGQH..PS..PTmnllNQSHR.....PASATGSQAAQAAQAQ.............QQ...........LQQA....RL..A..ELQARNQLQQQQQAQHQQQQAGMAQRP.....PGNF.TIP.PGFPihkfqNM..PPEQL.QQAIHnfNKQAQVQQAL.....AQQ....QQ..QQ..GQNPA
  635-  868 (297.06/44.38)	V.........LLQQ.....QQAA......LnaqnamrnGMAGNQ.ASQIQAAQ....................................NAllQQQLNNPGMtaeLAQKIQ.QQKMMNLHMQQGAL..AqkLAAQSvKP...QQPGQQAQNAAQQPQQQQ...QQQQAQTVQP.........PQPG.RPQLPFIPdiPFPP.....AFD..GMkyP.....PNAVA.....FLKKHFPQLEIP..VNN.L.P.NWGTFKDWA...........K.........QVS.VDVAMR...VRQLHFLHI......QEMAKKNAFVGAM..............QI..QYQEFVTRLGN..SRSAHLQQAQ.....MQAAHA.QA..QA..REAQQ
  887- 1151 (318.33/48.33)	SQTQAP.TPKMAQQsvtpnQQQQ....................Q.QQQQQQQQ....................................QQ..QRS.....L...KRPAEESASSQVTQS..QAQA..Q..AQAQA.QQQAQQQAQQQAQQQAQQQAQQQ...QQQQQGQKAG.........DWQSFLQKLLVMP..PEMQqqlLNQPRmaQL..PP....ERKAEitrviQLSRTKLQNAQNQQRSAAMqA.QLAAQNQNQ............AQNQnqtQVKQEP.QQPARPPTAQQPPQQKPQAA..A...PAAPGPQAAAPTAPiDPAK.....HLlkNKEQV..QLIR..QEETQRALARpiipmSNEVKAVMK..QALKESSQA
 1160- 1443 (282.64/41.70)	PMFLML.LP..AER.....IVRE......L........FQTRATvATQYEDPQfqntkdnftitpedleaaksqinryfnyvkaqvpklNE..QRIKQG......QPP.IPMSATMPSN..LQQQ..........Q.QHQLLQQRQALQQQQAQQQHQQN...LNQQAAAKAPvpnlgqvefQKQQQQQQ.QDL....KHPaaaLQQ........PA....QQ.........VGKSGAPAAPTPPIPTAA.SfPLHIPPRKKpksgpespnisKAPKP...DLKLTP..........TQ.LQAQAAAAAAAQA.PAMPAPPVANQAAP.KGNL.....PL..EYTHLCIVKTC..EYNTRGFANQ.....AELLRHLKEdhKDDINRG..
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.84|      15|      16|    1578|    1592|       3
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 1578- 1592 (25.80/16.38)	DLVIDSIDISMILTP
 1597- 1611 (28.04/18.44)	DLFSDDLKIPGISPP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.50|      11|      16|    1640|    1650|       7
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 1640- 1650 (24.68/14.61)	WNPFGIRNCGP
 1659- 1669 (21.82/12.06)	WELVDLPGTGP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32533 with Med15 domain of Kingdom Fungi
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