<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32513

Description Uncharacterized protein
SequenceMNPAAFSNPGGGMPGPGMPPQQMQQQQPPQSQQHQRTENAQHIMNQVAHELTQQPPLGGWKDDVPIKVRAMNVYQMITSLRLIQPQIDLKQAATAAISFETNAFKKAIERSDYEKDCNEKLHHIKDTRQRQAAAALQSGMAPQIGSAMQGQMPGNFMPHMNSNMQASPVGQGHPQMAMALDGPNQQAVMQQRHQMQQRQQIQQRQHQQQQQQQQHAMLQHQQRQQQQQQQQQQQQQQQQRLQQRSADEVPGFNDDASNTQFLNSEQVTQLAMQMQRRSTEEDFARIRRTMATRMDDNQKIFLQQRGIDPVQYYFRTQAALHLRRRMSRMENAQAGNSSNTAAPQNDGMMNQQAMVQNMMNLQRNNTAFSNNATQSQDSNTFFGNVENIQGQQADGVRSQEAGQLVVPVSSSQMGQAQLNNQQGLFTSQPGPNGQNNDVMNPMGMNTQMFTSQHMQQQFHAQQARVQAAHKAQMAMSGQVNPSGPAPFNQQQSPAMSMLNQGMSPTQTSPIPGPAQVRPPSRPATMGQVPGGMPVARQNMQGRPQIPSSLPQAVQDHLSSMTDQQLRDFFENQRRNHANNHARGNMPHPPPQQIPQQSQQGGLSQDAQTSQMFNGQMGNMRNSMSGPGGINPTGTINSAAAMNQNQPPLNPQSMTPQQRAAYLQRQNEIFRLNALRQQSNAHEMTAEQQQEMDRVPVPHSMIANYPQVPQHIKTWAQLKAWSSSNPLNNQGLEPGRLMNLQKVHFVHIAGAKQAQQNQHGQPNQLGQQLLSAQPNQQHPQGQPNHNQLQQGFQGPIAGPAPPNAPNPAPTMTLRPITQQDIQIARQKLGSKSPNFTDDQIRDLLQNRQRVLMEHALQQQRNMSAVAQQGPRPTASVSHTPVQAQPVPLPQQPPHVPIDVQAPNSRLQQVANAAKSGKAPAFTPKSKKRPTPDDAIETAPAATAATPQQNQGPPASAVPAPQNVVANVPSSQEAPSTTSASLSVAVEASLQRTFFRGQYFDRATADHNWNTNLSPELLEFYKEVARTAPVTNVQDISPESKEKMVNMIQKSLECLCRLDILAIHALANAPNTERNMRNLFAMRHQVWRQFTNTHDWTITDHFTVTPDYLSGAILYIRKLFHMMLSRAQQQQERRLLAEQGNVPIEPEQSVQTSALTPANLQQLQHQHQQQDEALQRAARASSQSAAVAAAPFGAPSPQGIPAYGPGALAPENLKLPPPKRRKVSEAGPTAASKTPVLADAEAKLKKAAMDVKPPSAPTLGPFKCSDLDCPNHYQGLPTQAALDKHIEENHKPEVDEVIEDPLQYFRDSLDIGLGLTASAQGGRATQGSGLVSDPPQTSSVRPGPATPASSMATPMARATSQLALAQNSPAHAGHALPAPQETVKKSDSQPSAPEATDLWANALFTREELANTFRPIVEHIRQRDGTAYLDDLCAKLKADEEAERAGRAPTEYSPDSDDLAGATQTPRDENNETVDWSQWTEEYDEESAKLTAEWMRIPPELQDHNAGILAGLTIDWDRLEREQKEAKAGLKGGGVTISSRA
Length1539
PositionTail
OrganismPenicillium oxalicum (strain 114-2 / CGMCC 5302) (Penicillium decumbens)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Penicillium.
Aromaticity0.04
Grand average of hydropathy-0.845
Instability index63.19
Isoelectric point8.10
Molecular weight169647.41
Publications
PubMed=23383313

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32513
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|    1241.75|     210|     210|     329|     538|       2
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   12-  219 (205.46/47.37)	GMPGPGMPPQQMQQQQPP..QSQQHQRTENA...QHIMnqvaheLTQQPP....LGGWKDDVpIKV.........R.AMNVyQMITSLRLiQ...PQ.......IDLKQ...AA..TAAisfetnAFKKAI..ERSDyekDCNEKLHHIKD..TRQRQAAAALQSGMAP....QIGSAMQ..........GQMPGNfMPHMNSNMQASPVG....QGHPQM.AMAL..DGP.NQQAVMQQ............................rhqmqqrqqiqqrqhqqqqqqqqhAMLQ
  220-  389 (241.39/56.81)	HQQ....RQQQ.........QQQQQQQQQQQ...QQRL........QQRSadevP.GFNDDA.SNT.........Q.FLNS.EQVTQLAM.Q...MQ.......RRSTEedfAR..IRR......T........MAT...RMDDNQKI.FL..QQ.........RGIDPVQY.YFRTQAALHLRRR...MSR............MENAQAG....NSSNTA.APQN..DGMMNQQAMVQNMMNLQRNNTAFSNNATQSQDSNTFFGNV........................ENIQ
  390-  594 (334.84/81.35)	GQQADGVRSQEAGQLVVPVSSSQMGQAQLNN...QQGL......FTSQPG....PNGQNNDV.MNP.........M.GMNT.QMFTSQHM.Q...QQ.......FHAQQ...AR..VQA......AHKAQM..AMSG...QVNPSGPAPFN..QQQSPAMSMLNQGMSPTQTSPIPGPAQVRPPSRPATMGQVPGG.MPVARQNMQGRPQI....PSSLPQ.AVQDhlSSMTDQQ.L.RDFFENQRRNHA..NNHAR........GNM...................phpppQQIP
  595-  758 (213.68/49.53)	QQSQQGGLSQDA.......QTSQMFNGQMGN...MRN.........SMSG....PGG......INPtgtinsaaaM.NQNQ.PPLNPQSM.T...PQ..........QR...A............AY.......LQR...Q...NEIFRLNalRQQSNAHEMTAEQQQEMDRVPVP.......HSMIANYPQVPQH.IKTWAQ........lkawSSSN....PLN......NQGLEPGRLMNLQKVHFVHIAGAKQAQ.................................QNQH
  759-  960 (246.38/58.12)	GQP.....NQLGQQLLSAQPNQQHPQGQPNHnqlQQGF......QGPIAG....P.APPNAP..NP.........ApTMTL.RPITQQDI.QiarQKlgskspnFTDDQ...IRdlLQN......RQRVLMehALQQ...QRNMSAVA..Q..QGPRPTASV...SHTPVQAQPVPLPQQ..PPHVPIDV.QAPNS.......RLQ..QVA....NAAKSGkAPAF..TPKSKKRPTPDDAIETAPAATA....ATPQQNQGPPASAV........................PAPQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.87|      29|      33|    1310|    1342|       3
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 1310- 1342 (45.28/28.12)	GlgltASAQG...GRATQGSGLVSD.PPQTSSVRPGP
 1345- 1377 (41.58/17.91)	P....ASSMAtpmARATSQLALAQNsPAHAGHALPAP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      97.31|      21|      21|    1492|    1512|       4
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 1474- 1490 (28.77/18.00)	WSQWTEEYDEESAK.....LTA
 1492- 1512 (38.81/27.32)	WMRIPPELQDHNAGILA.GLTI
 1514- 1535 (29.73/18.89)	WDRLEREQKEAKAGLKGgGVTI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     121.18|      28|      33|    1225|    1255|       5
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 1192- 1216 (38.66/13.58)	...APSPQGIPAYGPGALAPENLKLPPP
 1225- 1252 (44.53/24.42)	GPTAASKTPVLADAEAKLKKAAMDVKPP
 1258- 1281 (37.99/15.72)	GPFKCSDLDCPNHYQGLPTQAALD....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.70|      30|      33|    1395|    1425|       6
---------------------------------------------------------------------------
 1395- 1425 (47.41/32.91)	DLWANaLFTREELANTFRPIVEHIRQRDGTA
 1429- 1458 (50.28/30.61)	DLCAK.LKADEEAERAGRAPTEYSPDSDDLA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32513 with Med15 domain of Kingdom Fungi
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