<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32488

Description ZYBA0S09-04610g1_1
SequenceMYNNNERISNAHQRMPPGILQAGGQQRLQQQQQSTQGLNGRSLWQNSSQQFGNQQSSMLGVKSTTRNVHGKQPMLMANNDVFSIGPYKARKDSTRISVLEKYEIIGYIAAGTYGKVYKAKRRAGVRDDNINTDSVNTEANSSDLTGLQVGQSAFNDNSHHSGTISANGSFNPSEPGTASLRAPDQNAISSSGAHPSISTRTSNNDSTSKFQLSRTKHSSVYYAIKKFKTERDGVEQLHYTGISQSACREMALCRELDNKHLTQLAEIFLERKSIYMVYEFAEHDLLQIIHFHSHPEKRMIPQKMIGSIMWQILDGVSYLHQNWILHRDLKPANIMVTVDGCVKVGDLGLARKFCNMLQTLYTGDKVVVTIWYRAPELLLGARHYTPAIDLWAVGCIFAELIGLQPIFKGEEAKIDSKKSVPFQANQLQRILEVLGTPNQKNWPHIQRYPEYEQLGKFPKYRDNLGTWYHSAGGRDKNALDLLYKLLTYDPTQRIDAINALDHEYFTSGEFPVCENVFEGLNYKYPARRIHTNDNDITNLGVHKNKNLNAQQPAAVTNSSTAALGGLGVNRRILAAAAAAAAAVSGNNLTGQPSSRNGEPNRKKRK
Length605
PositionKinase
OrganismZygosaccharomyces bailii (strain CLIB 213 / ATCC 58445 / CBS 680 / CCRC 21525 / NBRC 1098 / NCYC 1416 / NRRL Y-2227)
KingdomFungi
Lineage
Aromaticity0.08
Grand average of hydropathy-0.574
Instability index41.58
Isoelectric point9.38
Molecular weight67551.35
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32488
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     119.00|      35|      53|     318|     353|       1
---------------------------------------------------------------------------
  318-  353 (59.60/47.20)	YLHQNWIL.HRDLKPANIMVTVdGCVKVGDLGLARKF
  372-  407 (59.40/41.77)	YRAPELLLgARHYTPAIDLWAV.GCIFAELIGLQPIF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      98.15|      24|      24|     536|     559|       2
---------------------------------------------------------------------------
  509-  532 (28.09/14.58)	..EFPVCENvfEGLNYKYPARRIHTN
  536-  559 (39.25/22.96)	ITNLGVHKN..KNLNAQQPAAVTNSS
  563-  584 (30.81/16.62)	LGGLGV..N..RRILAAAAAAAAAVS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.71|      18|      24|      20|      37|       3
---------------------------------------------------------------------------
   20-   37 (31.38/22.16)	LQAGGQQRLQQQQQSTQG
   43-   60 (33.33/24.05)	LWQNSSQQFGNQQSSMLG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.35|      14|      24|      85|      98|       4
---------------------------------------------------------------------------
   85-   98 (25.02/17.95)	GPY.KARKDSTRISV
  111-  125 (20.33/13.18)	GTYgKVYKAKRRAGV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     211.00|      52|      53|     188|     239|       5
---------------------------------------------------------------------------
  134-  182 (50.64/30.99)	........SVNTEANSSDLTglqvgqSAFN.DNSHHSGTISANGSFNPSEPGTASLRA
  188-  239 (84.56/56.54)	ISSSGAHPSISTRTSNNDST......SKFQLSRTKHSSVYYAIKKFKTERDGVEQLHY
  242-  291 (75.80/49.94)	ISQSACREMALCRELDNKHL......TQLAEIFLERKSIYM.VYEF.AEHDLLQIIHF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      25.04|       6|      27|     434|     444|       6
---------------------------------------------------------------------------
  434-  444 ( 9.58/17.43)	LGTpnqknWPH
  464-  469 (15.45/ 7.64)	LGT.....WYH
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32488 with CDK8 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) KAKRRAGVRDDNINTDSVNTEANSSDLTGLQVGQSAFNDNSHHSGTISANGSFNPSEPGTASLRAPDQNAISSSGAHPSISTRTSNNDSTSKF
2) MYNNNERISNAHQRMPPGILQAGGQQRLQQQQQSTQGLNGRSLWQNSSQQFGNQQSSMLGVKSTTRNVHGKQPMLMA
118
1
210
77










Molecular Recognition Features






MoRF SequenceStartStop




1) GEPNR
2) ILAAAAAA
597
572
601
579