<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32475

Description ZYBA0S07-04236g1_1
SequenceMNSGGKDTLSLEERSKNVQDLLQVLMDINDINGGNSDTAEKMKVHAKNFEAALYAKSSSKKEYMDSMREKVNAMRNTRDSRKRAATSAVSMGAVNRAMLTQQQQQQQQRLQQAGVSVNGNFIPNTLNMNPQMFLNEQAQVRQQAQQQLRNQQQVHQVQQQXXHPQQHPQQHPQQHPQQQQMQPQRPQLTSQHQQLINQMKVAIIPRELLQRIPNIPPGVNTWQQITELAQQKRLTPQDMQIAKEIYKLHQQLLYRSRLQQANVNNRMSLQQQQQLQQQQQQQQQRIAGLNNAQQQQHQQHQQQQSQQHPQQQTQQSMPQQQPQQHPQQQRMQQQAAQQRPVRADGEFPNILGQINQIFTSEEQRALLQEAVDACRNFQKTQFGNNMTDSNRQNFIRKYINQKALKKVQNMRLAQMAANGSAPQQHAQQHHAPLQQQTQAGMSAGTGASASGSGAMAGAMAGAMAGANAVNGPAATNAGMHSIPPAATVNNQFNQANLRGNAAAAAGQGVPMQQPNRANLQQARPSVLQAFAPTAQDVEVVKRISADAARTPLRLSDLTNTLSPQERDEIKRMLQMNQQLFAQVSNYAPQVYVLTKSENFLKEVLQLRIFVKEILEKCAKGIYVVKLDTVDKLVIKYKKYWESMKIQLLRRQQLIQQQQQLQQQKQKLAAQQQSGTNQAGLNISQQQQRVQGSLQQIQQQXQQQQQQQQQQQHAQRVPSSNDNPVVTGAANTVSAMSNTGASAAVNPNSASYTQVLPDSNTATSAAPIAVDTAKGGLGLDFMGSPKLTKDSPSAIPSAGISPKRELAKAAAANFSRARSNSVKPSPNASHSNINTPVVAPPPSGSRSATPGVLGIGDGISPSLNNKSHSGNHKTPSPLTVPSISQVQSTTSTSENNPFKAEEDTLRKMNIRKAEVISRFKHRQEVFSKSPLDMFLSTLADCIGVKDTNVESVMPIPPAVIDQINGTGKKKLSKVAQRAKDQDVVSVSIRDNNKLVMESKTDPSSQNYRIPSNALASIFKDVYGTSDIKTMNFSDPMIAARPVSDGAAGMSSQTNAKKRKLEELEISPANSVNSPSSSLMSDSKKVKIDSPEDMFVTKYGGDSGAKQSIDTAVPSTNVWDWNYWAKMEQT
Length1128
PositionTail
OrganismZygosaccharomyces bailii (strain CLIB 213 / ATCC 58445 / CBS 680 / CCRC 21525 / NBRC 1098 / NCYC 1416 / NRRL Y-2227)
KingdomFungi
Lineage
Aromaticity0.04
Grand average of hydropathy-0.799
Instability index57.92
Isoelectric point9.92
Molecular weight124338.18
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32475
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     162.24|      28|      28|     276|     303|       1
---------------------------------------------------------------------------
  157-  183 (43.20/12.13)	VQQQxxHPQQHPQQHPQQH...PQQQ...Q...MQP
  266-  291 (40.32/10.78)	..RM..SLQQQQQLQQQQQ...QQQQ...RIAGLNN
  292-  318 (46.59/13.72)	AQQQ..QHQQHQQQQSQQH...PQQQ...TQQSMP.
  649-  681 (32.12/ 6.93)	RRQQ..LIQQQQQLQQQKQklaAQQQsgtNQAGLN.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     133.76|      29|     599|     101|     130|       2
---------------------------------------------------------------------------
  101-  119 (28.12/ 7.62)	......................QQQQQQQQRL.Q..QAGVSVNG
  120-  152 (24.23/ 9.25)	NFiPNTLNMNP.qmflneqaqvRQQAQQQLRN.Q..Q.......
  327-  345 (26.66/ 6.77)	......................QQQRMQQQAA.Q..QRPVRADG
  346-  388 (28.66/ 8.17)	EF.PNILGQINqiftseeqralLQEAVDACRNfQktQFGNNMTD
  704-  721 (26.09/ 6.44)	......................QQQQQQQQHA.Q..RVP.SSND
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     154.34|      28|      28|     470|     497|       3
---------------------------------------------------------------------------
  417-  440 (34.26/15.28)	ANGSAPQqHAQQH.HAP....LQQQ.TQAG
  441-  467 (33.22/14.56)	MS..AGT.GASASgSGAMAGAMAGAMAGAN
  469-  496 (49.68/26.07)	VNGPAAT.NAGMH.SIPPAATVNNQFNQAN
  497-  518 (37.18/17.33)	LRGNAAA.AAG.Q.GVPM.....QQPNRAN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     208.10|      50|      56|     790|     839|       4
---------------------------------------------------------------------------
  732-  770 (51.34/25.41)	..............VSAMSNTGASAAVNPNSASYTQVLPDSNTATS..AAPIAVD
  790-  839 (82.28/45.28)	SPSAIPSA.....GISPKRELAKAAAANFSRARSNSVKPSPNASHSNINTPVVAP
  844-  896 (74.48/40.27)	SRSATPGVlgigdGISPSLN.NKSHSGNHKTPSPLTV.PSISQVQSTTSTSENNP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     151.59|      50|      54|     995|    1046|       6
---------------------------------------------------------------------------
  995- 1046 (81.64/57.61)	MESKTDPSS...QNYRI.PSNALASIFKDVYgtSDIKTMNFSDP..MIAARPVSDGAA
 1048- 1103 (69.95/42.93)	MSSQTNAKKrklEELEIsPANSVNSPSSSLM..SDSKKVKIDSPedMFVTKYGGDSGA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.10|      20|      29|     591|     615|      11
---------------------------------------------------------------------------
  591-  615 (22.39/40.14)	YVLtKsenfLKEVLQLRIFVKEILE
  622-  641 (35.72/33.29)	YVV.K....LDTVDKLVIKYKKYWE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.58|      20|     168|     220|     239|      12
---------------------------------------------------------------------------
  184-  209 (26.49/12.27)	QRPQLTSQhqqlinQMKVAIIPRELL
  210-  229 (34.09/18.07)	QRIPNIPP......GVNTWQQITELA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.52|      19|      19|      42|      60|      17
---------------------------------------------------------------------------
   42-   60 (29.87/22.72)	MKVHAKNFEAALYAKSSSK
   64-   82 (31.64/24.56)	MDSMREKVNAMRNTRDSRK
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32475 with Med15 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AARPVSDGAAGMSSQTNAKKRKLEELEISPANSVNSPSSSLMSDSKK
2) AGAMAGANAVNGPAATNAGMHSIPPAATVNNQFNQANLRGNAAAAAGQGVPMQQPNRANLQQARPS
3) LQQIQQQXQQQQQQQQQQQHAQRVPSSNDNPVVTGAANTVSAMSNTGASAAVNPNSASYTQVLPDSNTATSAAPIAVDTAKGGLGLDFMGSPKLTKDSPSAIPSAGISPKRELAKAAAANFSRARSNSVKPSPNASHSNINTPVVAPPPSGSRSATPGVLGIGDGISPSLNNKSHSGNHKTPSPLTVPSISQVQSTTSTSENNPFKAEEDTLRK
4) NMRLAQMAANGSAPQQHAQQHHAPLQQQTQAGMSAGTGASASGSGAMAG
5) QEAVDACRNFQKTQFGNNMTDSNRQNFIRKYIN
6) QQQQQRIAGLNNAQQQQHQQHQQQQSQQHPQQQTQQSMPQQQPQQHPQQQRMQQQAAQQRPVRADGEFPNILGQIN
7) SSSKKEYMDSMREKVNAMRNTRDSRKRAATSAVSMGAVNRAMLTQQQQQQQQRLQQAGVSVNGNFIPNTLNMNPQMFLNEQAQVRQQAQQQLRNQQQVHQVQQQXXHPQQHPQQHPQQHPQQQQMQPQRPQLTSQHQQLI
1037
460
693
409
368
280
57
1083
525
906
457
400
355
196










Molecular Recognition Features






MoRF SequenceStartStop




1) PPYIQERL
2) SQLKKEMRLLDENIGIRLLPINVSKKALGQDDDKLLEQTKLLKEILHSQSS
3
64
10
114