<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32468

Description ZYBA0S03-08944g1_1
SequenceMASKSPEAATKAMQSSTLVHKNKLTQCFDDIMRVAAEMMLHQQLKTVQLDCSVVNGFSYNQQRVLGEKIHVFHAILDDMETTLDKSKSYVEAVYETGREKEIKKEREREELRRRQEEEERKTKEQEELKRRQEMEXXKPKHNRHXQQQQQQQQQHHQQNGGSNPDPKMEFPMDSSGSLLADFPGSERAPIERNAAQSQKVSSDSMQPNLSASPQLGSNAAPSAASERVKQEQGLPQHDLGDLGSMDISMFPSMDTGFDMGNFNSETDAGKMNGPSDAAASMARPDDGNDIGVTMDDPSNNGLVDNNDDYLTLNDFNDLNIDWAATGDPGDLDLNGFNI
Length338
PositionTail
OrganismZygosaccharomyces bailii (strain CLIB 213 / ATCC 58445 / CBS 680 / CCRC 21525 / NBRC 1098 / NCYC 1416 / NRRL Y-2227)
KingdomFungi
Lineage
Aromaticity0.04
Grand average of hydropathy-1.010
Instability index52.96
Isoelectric point4.78
Molecular weight37420.74
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32468
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.29|      15|      15|     104|     118|       1
---------------------------------------------------------------------------
  104-  118 (27.04/20.98)	KEREREELRRRQEEE
  121-  135 (27.25/21.20)	KTKEQEELKRRQEME
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      89.58|      21|      21|     254|     274|       2
---------------------------------------------------------------------------
  238-  251 (18.90/ 6.58)	....DLGDLGS.MDIS.MF..P
  254-  274 (39.95/20.90)	DTGFDMGNFNSETDAG.KMNGP
  276-  297 (30.73/14.62)	DAAASMARPDDGNDIGvTMDDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.76|      11|      20|     304|     316|       3
---------------------------------------------------------------------------
  304-  316 (17.00/19.05)	DNNDdyLTLNDFN
  327-  337 (22.76/15.41)	DPGD..LDLNGFN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      74.02|      19|      22|     183|     203|       4
---------------------------------------------------------------------------
  166-  181 (26.54/14.58)	P........KME.FPMD....SSGSLLAD
  183-  203 (27.57/22.35)	P........GSERAPIErnAAQSQKVSSD
  207-  231 (19.91/ 9.24)	PnlsaspqlGSNAAP....SAASERVKQE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32468 with Med2 domain of Kingdom Fungi


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MDTGFDMGNFNSETDAGKMNGPSDAAASMARPDDGNDIGVTMDDPSNNGLVDNNDD
2) SKSYVEAVYETGREKEIKKEREREELRRRQEEEERKTKEQEELKRRQEMEXXKPKHNRHXQQQQQQQQQHHQQNGGSNPDPKMEFPMDSSGSLLADFPGSERAPIERNAAQSQKVSSDSMQPNLSASPQLGSNAAPSAASERVKQEQGLPQHDLGDLGSMDISMFP
253
86
308
251










Molecular Recognition Features






MoRF SequenceStartStop




NANANA