<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32428

Description Serine threonine-protein kinase ssn3
SequenceMSHGSSGSGPNSGSGLRQGLKRIQSSFDDPTDRGIGYVSYQSKVRVTDKYRVIGFISSGTYGRVYKAVSRQGLPGEFAIKKFKPDKEGEQITYTGISQSAIREMALCSELSHSNVIRLVEIILEDKAIFMVFEYAEHDLLQIIHHHTQQPRHPIPPATIKSIMFQLLNGCQYLHTNWVLHRDLKPANIMVTSSGQVKIGDLGLARLFYKPLHSLYTGDKVVVTIWYRAPELLLGARHYTPAIDMWAIGCIFAELLSLRPIFKGEEAKMDSKKTVPFQRNQMQKIIDIMGMPTKERWPLLANMPEYQHLMPMQPAGHHHGHSHHHLSPSTHGNLEKWYYTTISQGQTSAPIQSTNASQLASLGTDGYRLLAGLLEYDPEKRLTAEKALEHPFFTANDNIPLYNNCFEGIKTEYPHRRVSQEDNDIRTSSAPGTKRSGLQDDSLRQAKRLKE
Length450
PositionKinase
OrganismOphiostoma piceae (strain UAMH 11346) (Sap stain fungus)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Sordariomycetidae> Ophiostomatales> Ophiostomataceae> Ophiostoma.
Aromaticity0.08
Grand average of hydropathy-0.469
Instability index40.18
Isoelectric point9.07
Molecular weight50804.40
Publications
PubMed=23725015

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32428
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      91.94|      25|     168|     133|     158|       3
---------------------------------------------------------------------------
  133-  158 (44.96/25.85)	EYaEHDL.LQIIHHHTQQPRHPIPPAT
  304-  329 (46.98/23.41)	EY.QHLMpMQPAGHHHGHSHHHLSPST
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.18|      18|      52|       1|      20|       5
---------------------------------------------------------------------------
    1-   20 (29.77/26.61)	MSHGSSGSGPNSGSglRQGL
   56-   73 (32.42/21.36)	ISSGTYGRVYKAVS..RQGL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32428 with CDK8 domain of Kingdom Fungi
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