<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32423

Description Uncharacterized protein
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
Length1320
PositionTail
OrganismMucor circinelloides f. circinelloides (strain 1006PhL) (Mucormycosis agent) (Calyptromyces circinelloides)
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina> Mucoromycetes> Mucorales> Mucorineae> Mucoraceae> Mucor.
Aromaticity0.03
Grand average of hydropathy-1.050
Instability index72.65
Isoelectric point8.88
Molecular weight146742.91
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32423
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     144.88|      25|      25|     436|     460|       1
---------------------------------------------------------------------------
   15-   38 (48.98/ 7.28)	QQQQPPQQQQQQQQQQVQQQ.QQQV
  420-  445 (47.02/ 6.52)	LQAQQARAQQQQQQQQAQAQAQAQA
  771-  795 (48.88/ 7.24)	QQQQQPSQLQQQQQQQQQQQQQQQA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     137.72|      25|      25|     462|     486|       4
---------------------------------------------------------------------------
  232-  255 (45.48/ 6.65)	QPQPQVSQPAQPQ.QQQQQAQQQAQ
  338-  359 (47.32/ 7.41)	GPQGQQQQQQQQQQQ...QGQQQQQ
  462-  486 (44.91/ 6.41)	QAQAQAQAQAQAQAQAQAQAQAQAQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     750.51|     108|     388|     114|     221|       5
---------------------------------------------------------------------------
  114-  218 (183.92/29.23)	..........................................RKFHQ.IKFQLQSQ.....NGGAPMLN.DS.Q...LQLSLN...IAGG..QQMSPLLQQQQQ........QQQ...QQQQQQQ...QQVQQ.TQQ.QQ.........TASPQVA.................................................PV.QQLQNLSSP.........LNMNQQQQQNMN.NQNQM...RPNM
  219-  415 (81.12/ 6.96)	FQQnmmqgrpqqqqpqpqvsqpaqpqqqqqqaqqqaqmlalqRTAAQaMAAAAAAG.....NNGSVGANgNT.P...AQVAAN...VNTA..QQQIP.LSVLQN........LNM...GNVNQAV...VNMSP.RQF.QV.........YLAHQIAlhqgpqgqqqqqqqqqqqqgqqqqqgtatdnsnllgmnlpnnanqnfrpPV.SGVNATSSP.........MQANNFSNAVNQ.QQQQL...NPEM
  488-  604 (101.48/11.37)	..........................................QAQAQ.AQAQAQAQakqeaQQKAQQLA.QQ.Q.............A....QQQAQLVAQQQV........QQQlaaQQQAQQQlaaQQAQQlAQQ.QQ.........QQQQQTS.................................................QAsHQLPNVSAPnlqsgavpnLGGTPQQQQ.....QQQLfvnRAGL
  830-  912 (89.79/ 8.83)	SHP.......................................NSTTS.TP.TLQNT.....NQQNAMKR.PSiD...LKLPAN...KKQR..TNQSPALSAAGT........PQQ...QQQQPKA...SPNQQ.PNRlQS.........GASP...........................................................NASSP.........ASVA.....................
  913-  989 (86.24/ 8.06)	.............................................................GAGAGA.............GAA...AAAGtpNQMVDLTHTASP........QQQ...QHIEEQQ...HQ.....QQ.QM.........NAGVQ......................................................EQMGNSAAA.........ITAASQAGMSL..SQRQA...QSQM
  990- 1108 (110.24/13.26)	IYQ......................aaiagglspaivnllppRAL.Q.CSWLLQQS.....AQNRIVLT.PS.QqeqIRAMLNervEAAK..QQLA...RQEQA........QQQ...QQQQLQQ...QQ.QQ.QQQ.QA.........LNRRQSS.................................................GV.S.....GNA.........IDLTGDN..NNV.KSEEI...KQDT
 1109- 1198 (97.72/10.55)	SQQ........................................................................................aAQMMHLLQQQQQmqsqalllQQQ...QQQQQHQ...QQQQQ.QQQ.QQpilqtkltpTQSPR...................................................PI.TTVPGSAAT.........I.LATTPNATTNtPMAAL...RPGM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     116.61|      33|      69|     725|     757|       6
---------------------------------------------------------------------------
  725-  757 (61.39/17.60)	QQQHQQQQQQQQQQQQQQQSSPAVGTPQQAD.NL
  796-  829 (55.23/14.58)	QAAQLQAQAQAQQQQQQRQNTPQMANQNRMDiNL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.18|      36|     617|     652|     688|       8
---------------------------------------------------------------------------
  652-  688 (56.59/49.76)	KPMYDKIDnLLPVFYALTSNAEAAR.RLILMKYMFEDQ
 1272- 1308 (61.59/48.55)	KPVIDKQD.IKNTWYEVGMDIDVPRmSEIMVGFHWQDD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32423 with Med15 domain of Kingdom Fungi
Unable to open file!