<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32412

Description Uncharacterized protein
SequenceMNQQNPNLQTPTGQPPPPPQSQTPQQQHQAQQQQQHQAQQQQQHQQQQQHQQQQQLQLQQQQQQVNLGHPNDIPNSNWRNEVTVPDRSRFVSQLSLALKHLSPTTPENETYNVASNFEAGLYQRCTSKNQYILAYAKKFQHIKDQINQSTNMGNNMNGMMQQQQPMSPLVGNANGQVASSPQLQQQQLQQQQQQQQQQQQQGQRNNFQSPLSLNQQQLQQQQQQQQQQQQQPVGQNQMRPQQTNYQQQAMLQQGRPPQQAIQSPAQQQAQAQMLAYQRSAAAAAMAVSNAPQAMQQVQQRPPQQQSQQPQQPNQIPLNLLQNMNASNAAQAGLNISPQQFQMYFARQMALQQQQQQQQQQQQQQQQQSQQLQSSPHIQNHMLQQAQSSPIQQQGFLPPQGQPGNGMSGMTQQQLMNMGLNKAAAMGNNGNGVTGNVPNGPMNNGNFRPGQPQQQQSPFTQPSDANAAIGSPMQQSAVTANYPNAMGNPGGALSASSTPVSVPATLASVQQQQKLQQQQQQFANMRPPPQSQQTSQQAQQMVNQEMLMQRMQQQQQQQQQAQAQAQHNMNGGPRPPLPPQQTPQFVSQQQQAQQQQQGLQRPMMPQQPMQMQMQPNGVLKPLTLQQRNSAAGIVKQMDEGVRQGRVRGPVIEDLSESDKMAIRDQISQMKSMYDKIDNLLPVFLAMTSNVEATRRLILMKYMFEDQLVALPQNKFFISLENLHKLREQFSGYFTWVRNAVGQQQQQQQQMNAMAGGNANPQQQQQQIGLGLLPMHMQQQQQQQQLQNQGPMMNYNQMMNQQGMQSALMHQGVMNQAQSIGQQSQAQAMAMLRQQQALAQQQQQQQQQHPAQRQQTHAQDHNSQDPSTAPPSTSAIVPSNSNENTPVMANSTAVTTPAAAATPTTPSLGIRRGSIDLKLPPSKKQRGSRSSAASQSPTLSRKNQKAADKEKAQTAAANAAATTTTSTATTSAAASQSTPVSTANTGNSTPASAPASSTLAQQQPPQSAPEVTSISASNSPAMMNNTNINLSHPSNPGAFNNTAMSQQQQQQPNNGMDMSQFNPNGMMMGNNNGGIPVKGGMPLSQHQAQSQAFYMAAVSNGIPPQIVNLLPPKALQFNWILQQAAQNKMTLMPNQQQQIQALLNDHIEAAKQQLSQQSLDASPRHHPSQQQTPSAANTPVSMAMTQSPQVNNAYIKQEDSPQQQQFNMQQQQHHHHQQQQQQLQHLQQQQHMQQMRQMQMQQQLHLQQQQQQQQQQQQQGMPPQDGQIPGTPTSQQTNAMMVQPSMTLHPGMVGGGPNTDSNGEDLMSSLYFSNGMNPKSNTNPADLYASPHQQQQQHHHPSQQSLPPPQQQQQQQQQQQQQQQQQSSSQPPSQQQQYDGGYSSALKEGYKDETFGTPDMSLLTKPTSVIKEEDALVESGDLQSSWYDSTTSGIDLGLDGFDWDNNDFVKLDDGNDTTAIVTATGSSATANASSSSSSAAANTTTANASNNVPSSSSSNNNNNTNNGDGSSSQQQQDDKKLMDESGKLCAVSL
Length1531
PositionTail
OrganismMucor circinelloides f. circinelloides (strain 1006PhL) (Mucormycosis agent) (Calyptromyces circinelloides)
KingdomFungi
LineageEukaryota> Fungi> Fungi incertae sedis> Mucoromycota> Mucoromycotina> Mucoromycetes> Mucorales> Mucorineae> Mucoraceae> Mucor.
Aromaticity0.03
Grand average of hydropathy-1.081
Instability index81.20
Isoelectric point8.66
Molecular weight169035.23
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32412
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             9|    1540.70|     165|     165|      39|     203|       1
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   39-  203 (288.90/43.84)	Q..QQQQH.QQQQQHQ......................QQQQLQ.........LQQQQ....QQVNLG.HPNDIPNSNWRNE.VTVPDRSRF.VSQL.....SL........ALKH.......LSPTTPENETYNV....A......SNFEAGLYQRCTS............K.....NQ.YILAYAKKFQ.....HI...KD....QINQSTNMG.....NNMNGMMQQQQ...P............MSP.........LVGNAN.GQVAS......S..P..........QLQQQQLQQQQQ................Q.....QQQQQQQGQ
  206-  357 (166.33/20.52)	N.fQSPLS.LNQQQLQ......................QQQQQQ.........QQQQQ....QPV..G.Q.....N.QMR......PQQTNY.QQQA.....MLqqgrppqqAIQ.........SPAQQQAQAQML....A.............YQR..S............A.....AA.AAMAVSNAPQ.....AM...Q.....QVQQRPP...............QQQ...S............QQPqqpnqiplnLLQNMN.ASNAAqaglniS..P............QQFQMYFARQ................M.....ALQQQQQQQ
  358-  531 (170.85/21.38)	Q..QQQQQ.QQQQS..........................QQLQssphiqnhmLQQAQsspiQQQGFL.PPQGQP.GNGMSG.MT...QQQL.MN.M.....GL....nkaaAMGNngngvtgNVPNGPMN...N............GNFRPGQPQQQQS............P....fTQ.PSDANA.........AI...GS....PMQQSAVTA.....NYPNAM...................................GNPG.GALSA......SstPvsvpatlasvQ.QQQKLQQQQQ................Q...faNMRPPPQSQ
  551-  731 (152.93/17.97)	Q..QQQQQ.QQQAQAQaqhnmnggprpplppqqtpqfvSQQQ.Q.........AQQQQ....Q..GLQ.RPM.MPQQPMQMQ.MQ.PN..GV.LKPL.....TL........QQR.................................NSAAGI....VK............Q.....MD.EGVRQGRVRG.....PV...IE....DLSESDKMAirdqiSQMKSMYDKID...N............LLP.........VFLAMT.SNVEA......T..R..........RLILMKYMFEDQlvalpqnkffislenlH.....KLREQFSGY
  740-  850 (160.11/19.33)	G..QQQQQ.QQQMNAM......................AGGNAN.........PQQQQ....QQIGLGlLPMHMQQQQ.............................................................................QQQQL............Q.....NQgPMMNYN...Q.....MM...NQ....QGMQSALMH.....Q...GVMNQAQ...S............IGQ..............Q.SQAQA......M..A..........MLRQQQALAQQQ................Q.....QQQQQHPAQ
  900- 1052 (143.66/16.20)	T..PTTPS.LGIRRGS......................IDLKLP.........PSKKQ....RGSRSS.AASQSPTLSRKNQ..KAADKEK...AQT.....AA........ANAA.......ATTTTSTATTSAA....AsqstpvSTANTGNSTPASA............P.....AS.STLAQQQPPQ.....SA...PEvtsiSASNSPAMM.....NNTN..INLSH...P............SNP................G........................AFNNTAMSQQQQ................Q.....QPNN.....
 1055- 1220 (143.19/16.11)	........................................................DM....SQFN....PNGMMMGN..NN.GGIPVKGGMpLSQHqaqsqAF........YMAA.......VSNGIPP.QIVNLlppkA......LQFNWILQQAAQN............KmtlmpNQ......QQQIQallndHIeaaKQ....QLSQQSLDA.....SPRHHPSQQQT...PsaantpvsmamtQSP.........QVNNAY.IKQED......S..P..........QQQQFNMQQQQH................H.....HHQQQQQ.Q
 1222- 1354 (177.02/22.55)	QhlQQQQHmQQMRQMQ......................MQQQLH.........LQQQQ....QQQQQQ.QQQGMP...........PQDG.....QI............................PGTPTSQQTN................AMMVQPSMT............L.....HP.GMVGGGPNTD.....SN...GE....DLMSSLYFS.....NGMN.........................P.........K.SNTNpADLYA......S..P..........HQQQQQHHHPSQ................QslpppQQQQQQQ..
 1355- 1514 (137.71/15.07)	.......Q.QQQQQQQ......................QQSSSQ.........PPSQQ....QQYDGG.YSSALKEG.YKDEtFGTPD........M.....SL........LTKP.......TS.VIKEEDALVE....S......GDLQSSWYDSTTSgidlgldgfdwdN.....ND.FV.....KLD.....DG...ND....TTAIVTATG.....SSATANASSSSssaA............ANT.........TTANAS.NNVPS......S..S..........SSNNNNNTNNGD................G.....SSSQQQQ..
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32412 with Med15 domain of Kingdom Fungi
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