<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32392

Description Related to suppressor protein PSP1
SequenceMSSGPLKTGPSSRLGQGSHPTAPGNNQSLLLEKLHARTSTPDSEALASSDDEGEHRYESATAASHSASQPPRPVRRPSWLNETSQTLGRPRRGSIASNSMSPTTSHPSTPSGEAGGAWGSHSASSVMGRGVWRTWLFMGLSEVLPSPTSTMPPGGGNSFFGSDMQTSPVSRDPAPNSQIPFAIPLHPTPKTYRSQSYSVGQLDPESTATPPTMSSSAIMGRARYPALQHRPSRPSMLSEMANDGSMLGKVKEVEDDDDESPSESMQSSFHQSDAKTIEMLARENAMLRQQQQQQQQQQQQQQQQQQQTQYNNARIRPRAVTGSSYPANGYPIRDTVPEESDYAIDELDEANESGDMLAKRALSRRMSEYGAGSLRSPFENNRKPENANLKKALWSSSLGFNPSDISQSRRHSFANMPTRQGSISSIPDAAALEPSALDMQQSQEYPPGYPDPAAFSASSHASQYFGVGGGANIGNAYQTGFANQYGSPYGLPTAYGNRAPSPHRNVYSIAQPRHNQLLHIVLFKCARADVFYIQEGTGLNVKPGDLVIVEADRGTDLGTVAKDNVEWQVAKELKEHYAEEQYKWLMMYSQNAAVAQEGSSAGLLASSTGLQGSAVGGMGPPSQHHAQEPNAGELRPKLIKRLAQNHEIQALRDKEGQEAKAKRVCMQKVKEHALNMEILDAEFQMDWKKLTFYYFADSYINFNSLVTDLFKIYKTRIWMSAINPASFASPTLGIQAPSGIGPGAVNANRGAGGNDRRQNQQVQESHQASAFPGGARDGRGFRPAPTFSQPFGNEGRLAQPSGYPPSNYPYGQFANPYSNPRSNVGYGASSGAMPGAMEGYPVGVPQLGEYTSMRQRFPNPQSGPSPAPHSQATSPLAPQNDWVGSFQGLSLNTH
Length894
PositionTail
OrganismGibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) (Bakanae and foot rot disease fungus) (Fusarium fujikuroi)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Nectriaceae> Fusarium> Fusarium fujikuroi species complex.
Aromaticity0.08
Grand average of hydropathy-0.746
Instability index58.69
Isoelectric point6.91
Molecular weight96813.78
Publications
PubMed=23825955

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32392
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     573.08|     146|     352|     366|     515|       1
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  366-  515 (246.21/100.76)	MSEYGAGSLRSP.....................FENNRKpENANLKKALWSSSLgfnPSDISQSRRHSFANMPTRQGSISSI.....PDAAALEPSALDMQQSQEYPPGYPDPAAFSASSHASQY........FGVGG.GANIG..NAYQTGFA..NQYGSPYG.LPTAYGNRAPSPHRNVYSIAQPRHN
  520-  629 (130.44/45.86)	..............................................IVLFKCA....RADVFYIQEGTGLNV..KPGDLVIVeadrgTDLGTVAKDNVEWQVAKELKEHYAE.EQYKWLMMYSQN........AAVAQeGSSAG.lLASSTGL.....QGSAVG......GMGPPSQHH....AQEP...
  719-  881 (196.43/72.88)	MSAINPASFASPtlgiqapsgigpgavnanrgaGGNDRR.QNQQVQESHQASAF...PGGARDGR..GFRPAPT.................FSQPFGNEGRLAQ..PSGYP.PSNYPYGQFANPYsnprsnvgYGASS.GAMPGamEGYPVGVPqlGEYTSMRQrFPNPQSGPSPAPHSQATSPLAPQND
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     124.59|      32|      54|      58|      90|       2
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   58-   90 (56.09/34.39)	ESATA.ASHSASQ.PPRPVRRpSWL.NETSQTLGRP
   93-  107 (25.03/ 8.70)	GS..I.AS..................NSMSPTTSHP
  113-  147 (43.47/21.28)	EAGGAwGSHSASSvMGRGVWR.TWLfMGLSEVLPSP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.85|      16|      30|     639|     657|       3
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  639-  657 (23.53/23.96)	IKRLAQNHEIQalrDKEGQ
  669-  684 (28.31/19.13)	VKEHALNMEIL...DAEFQ
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     118.66|      27|      30|     197|     223|       4
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   11-   48 (28.15/10.18)	SSRLGQGSHPtapgnnqsllLEKLHAR.TSTP.DSeaLAS
  196-  215 (28.80/10.57)	.......SYS..........VGQLDPESTATP.PT..MSS
  216-  238 (38.19/16.14)	SAIMGRARYP..........ALQHRPSR.....PS..MLS
  244-  267 (23.52/ 7.44)	GSMLG..............kVKEVEDDDDESPsES..MQS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.51|      15|      15|     311|     325|       5
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  311-  325 (26.33/17.32)	NNARIRPRAVTGSSY
  328-  342 (28.18/19.13)	NGYPIRDTVPEESDY
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32392 with Med15 domain of Kingdom Fungi
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