<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32243
Description |
Uncharacterized protein (Fragment) |
Sequence | MGSEIGQEWREEIFQKIRSMNEVYAPYVNDVYQIATDVLHCQEPLPQQQRTENVESWQSFKKMVEELRQFLSVTKSSITPAFKKKLAFHEKMLKECINMYRKMQTRQQGELPQAQTVQDQSHDNQTNLQMQSMNMHVTGPRLQQSSNVLSSCPGVSAPQQNVPISIPASSCEYSITEFLNRQSLRKTVQQGQLPKSQNQHVQQRQSQTVQDQSHDNQKNPQIQSMSMQGAGPRAQQSKQGVVQSFAIGIAGISGSPILQELTSPDGNTMNPLTSTCGKSSATEPSIERLIRAVQSISSQALSSAVSDIISVVRMGDRIAGSFPGNVSTASVGEDLVAMSLLQERNFMTQEEMIATMKRKRQITAMPLSVASLGGSFGDRYKQFAGLIASDMQSSVTCGGKKASTEAEHTLLEEIKEINQRLIDTVVEICDDEDAADHSEGAISSKGCEGTTVKFSFISVSLSPALKAHLSSTHMSPIRPLRLLVPRSYPNGSPSLLDILPVETSKENEDLSSKVMARCNILLKKMSQPMSLKDIAKTWDSCVRDVICKYAQQFGGGTFSSKYGAWEKY |
Length | 568 |
Position | Tail |
Organism | Capsella rubella |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Brassicales> Brassicaceae> Camelineae> Capsella.
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Aromaticity | 0.05 |
Grand average of hydropathy | -0.464 |
Instability index | 63.99 |
Isoelectric point | 7.54 |
Molecular weight | 62764.50 |
Publications | PubMed=23749190
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Function
Annotated function |
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GO - Cellular Component | |
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro
transcription coactivator activity GO:0003713 IEA:InterPro
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GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP32243
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 256.13| 79| 91| 68| 157| 1
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59- 150 (132.04/90.22) SFKKMVEelRQF.LSVTKSSItpafkkklafhEKMLKECINMYRKMQTRQQGELP..........QAQTVQDQSHDNQTNLQMQSMNMHVTGPRLQQSSN..VLS
151- 244 (124.09/67.84) SCPGVSApqQNVpISIPASSC...........EYSITEFLNRQSLRKTVQQGQLPksqnqhvqqrQSQTVQDQSHDNQKNPQIQSMSMQGAGPRAQQSKQgvVQS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 367.79| 114| 119| 328| 445| 2
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275- 323 (38.09/16.84) .......................................................................TCG..KSSATEPSIERLIRAVQSIsSQALSSAVSD..IISVVRMGDRIAG..SFP
328- 445 (172.66/119.33) TaSVGEDLVAMSLLQE.RNFMTQEEMiATMKRKRQItaMPLSVASLGGSFGDRYKQFAGLIASDMQSSV..TCG..GKKASTEAEHTLLEEIKEI.NQRLIDTVVE..ICDDEDAADHSEGAISSK
450- 561 (157.04/95.99) T.TVKFSFISVSLSPAlKAHLSSTHM.SPIRPLRLL..VPRSYPNGSPSLLDILPVETSKENEDLSSKVmaRCNilLKKMSQPM......SLKDI..AKTWDSCVRdvIC..KYAQQFGGGTFSSK
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