Description | Uncharacterized protein (Fragment) |
Sequence | MGSEIGQEWREEIFQKIRSMNEVYAPYVNDVYQIATDVLHCQEPLPQQQRTENVESWQSFKKMVEELRQFLSVTKSSITPAFKKKLAFHEKMLKECINMYRKMQTRQQGELPQAQTVQDQSHDNQTNLQMQSMNMHVTGPRLQQSSNVLSSCPGVSAPQQNVPISIPASSCEYSITEFLNRQSLRKTVQQGQLPKSQNQHVQQRQSQTVQDQSHDNQKNPQIQSMSMQGAGPRAQQSKQGVVQSFAIGIAGISGSPILQELTSPDGNTMNPLTSTCGKSSATEPSIERLIRAVQSISSQALSSAVSDIISVVRMGDRIAGSFPGNVSTASVGEDLVAMSLLQERNFMTQEEMIATMKRKRQITAMPLSVASLGGSFGDRYKQFAGLIASDMQSSVTCGGKKASTEAEHTLLEEIKEINQRLIDTVVEICDDEDAADHSEGAISSKGCEGTTVKFSFISVSLSPALKAHLSSTHMSPIRPLRLLVPRSYPNGSPSLLDILPVETSKENEDLSSKVMARCNILLKKMSQPMSLKDIAKTWDSCVRDVICKYAQQFGGGTFSSKYGAWEKY |
Length | 568 |
Position | Tail |
Organism | Capsella rubella |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Capsella. |
Aromaticity | 0.05 |
Grand average of hydropathy | -0.464 |
Instability index | 63.99 |
Isoelectric point | 7.54 |
Molecular weight | 62764.50 |
Publications | PubMed=23749190 |
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro transcription coactivator activity GO:0003713 IEA:InterPro |
GO - Biological Process |
Binary Interactions |
Repeats | >MDP32243 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 256.13| 79| 91| 68| 157| 1 --------------------------------------------------------------------------- 59- 150 (132.04/90.22) SFKKMVEelRQF.LSVTKSSItpafkkklafhEKMLKECINMYRKMQTRQQGELP..........QAQTVQDQSHDNQTNLQMQSMNMHVTGPRLQQSSN..VLS 151- 244 (124.09/67.84) SCPGVSApqQNVpISIPASSC...........EYSITEFLNRQSLRKTVQQGQLPksqnqhvqqrQSQTVQDQSHDNQKNPQIQSMSMQGAGPRAQQSKQgvVQS --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 367.79| 114| 119| 328| 445| 2 --------------------------------------------------------------------------- 275- 323 (38.09/16.84) .......................................................................TCG..KSSATEPSIERLIRAVQSIsSQALSSAVSD..IISVVRMGDRIAG..SFP 328- 445 (172.66/119.33) TaSVGEDLVAMSLLQE.RNFMTQEEMiATMKRKRQItaMPLSVASLGGSFGDRYKQFAGLIASDMQSSV..TCG..GKKASTEAEHTLLEEIKEI.NQRLIDTVVE..ICDDEDAADHSEGAISSK 450- 561 (157.04/95.99) T.TVKFSFISVSLSPAlKAHLSSTHM.SPIRPLRLL..VPRSYPNGSPSLLDILPVETSKENEDLSSKVmaRCNilLKKMSQPM......SLKDI..AKTWDSCVRdvIC..KYAQQFGGGTFSSK --------------------------------------------------------------------------- |
IDR Sequence | Start | Stop |
1) LRKTVQQGQLPKSQNQHVQQRQSQTVQDQSHDNQKNPQIQSMSMQGAGPRAQQS 2) QQGELPQAQTVQDQSHDNQTNLQMQSMNMHVTGPRLQQSSNVLSSCPG | 184 107 | 237 154 |
MoRF Sequence | Start | Stop |
NA | NA | NA |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab