<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32226
Description |
Mediator of RNA polymerase II transcription subunit 7 |
Sequence | MATATYPPPPPYYRLYKEENYDSAPEPPPPIEGTYVSFGGNYTTEDVLPSLEEQGVPQLYPKDTNVVDYKKELRSLNRELQLHILELADVLVERPSQYAKRIGDISSIFKNLHHLLNSLRPHQARATLIHIMELQIQQRKQAVEDIKRRREEAQRLLKDAFVTLDGQ |
Length | 167 |
Position | Middle |
Organism | Capsella rubella |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Brassicales> Brassicaceae> Camelineae> Capsella.
|
Aromaticity | 0.08 |
Grand average of hydropathy | -0.692 |
Instability index | 73.23 |
Isoelectric point | 5.97 |
Molecular weight | 19322.68 |
Publications | PubMed=23749190
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery.
ECO:0000256 RuleBase:RU364060
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP32226
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 43.81| 10| 17| 7| 16| 1
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7- 16 (24.59/11.37) P.PPPPYYRLY
25- 35 (19.22/ 7.64) PePPPPIEGTY
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 96.51| 34| 45| 46| 87| 2
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46- 87 (52.27/50.52) DVL...PSleeqgvpqLYPKD.TNVVDYKKELRSLNRELQ........LHILEL
89- 134 (44.24/27.55) DVLverPS........QYAKRiGDISSIFKNLHHLLNSLRphqaratlIHIMEL
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