<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32215
Description |
Uncharacterized protein |
Sequence | MEYANGDDWREELFQKIRSMKEIYLPHVNDLYQRTVGKLHHQQSLLYQQRSEHFEKLKQLVTMLESIIQFLSLPKSKIRPAIKDNVDKNEKKIICILEKHRLRQIKQSHVPAMQLNMSSSQRDPRQGSALNNANAGDWQEEIFQKIKLMKEMYLQDLAEIYQRVQFKLHQQDSIQQQQRSHMYEKLKLFEIMLEKMIQFLSVPKRNIMPAFEDKVAHYEQQIIGLLNVHRAMKPVQQGQLPQYAPVQDQPHDIQTNPQMQSMSMQGAGTWAQQGSLPNMQNNVLSSRPGVLAPHQNIPISIHTSSLASGQGNAVTNNGQQFVMGSINQPQLSSNLLQYQHVMQHQDQQMTQQLIQHPQLWIMQQQEQKQFQERQQAAQLQQGQQSQNQAFLEQMIPQLQLHQQFIPLQQYEQQREEVSGKVTYSLFPTQNVENQQRQVYQTQRALPEMPSNSKAQRESPNGGDWQEEVFQKIKPMKEMYLPDLAEMYHRVAVKLHQHQERSDEFEKLEKIKKRLERMIHFLSVPKSSITFMPDLKDNVDYYEKQIIHFLNMHKPRVGGYFI |
Length | 561 |
Position | Tail |
Organism | Capsella rubella |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae>
rosids> malvids> Brassicales> Brassicaceae> Camelineae> Capsella.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.809 |
Instability index | 53.51 |
Isoelectric point | 8.95 |
Molecular weight | 66099.75 |
Publications | PubMed=23749190
|
Function
Annotated function |
|
GO - Cellular Component | |
GO - Biological Function | chromatin DNA binding GO:0031490 IEA:InterPro
transcription coactivator activity GO:0003713 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP32215
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
5| 346.59| 59| 127| 42| 100| 1
---------------------------------------------------------------------------
42- 100 (98.08/49.39) QQSL.LY...QQRSEHFEKL..KQLVTMLESIIQFLSLPKSKI.........RPAIKDNVDKNE....................KKIICILEKH
171- 229 (103.05/52.25) QDSI.QQ...QQRSHMYEKL..KLFEIMLEKMIQFLSVPKRNI.........MPAFEDKVAHYE....................QQIIGLLNVH
358- 401 (28.73/ 9.39) QLWI.MQ...QQEQKQFQ..............................................erqqaaqlqqgqqsqnqaflEQMIPQLQLH
402- 459 (33.87/12.36) QQFIpLQqyeQQREEVSGKVtySLFPT......QNVENQQRQVyqtqralpeMPS..NSKAQRE....................SP........
496- 552 (82.86/40.62) .....QH...QERSDEFEKL..EKIKKRLERMIHFLSVPKSSI.......tfMPDLKDNVDYYE....................KQIIHFLNMH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 230.06| 41| 126| 1| 41| 2
---------------------------------------------------------------------------
1- 41 (80.98/54.03) MEYANGDDWREELFQKIRSMKEIYLPHVNDLYQRTVGKLHH
130- 170 (82.01/54.81) LNNANAGDWQEEIFQKIKLMKEMYLQDLAEIYQRVQFKLHQ
460- 495 (67.08/43.50) ....NGGDWQEEVFQKIKPMKEMYLPDLAEMYHRVAVKLH.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 40.14| 15| 27| 294| 320| 3
---------------------------------------------------------------------------
294- 320 (14.05/30.26) HQnipiSIHTSSLASgqgnavtnNGQQ
323- 337 (26.09/12.89) MG....SINQPQLSS........NLLQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 51.41| 15| 35| 236| 250| 4
---------------------------------------------------------------------------
236- 250 (29.14/13.08) QQGQLP..QYAPVQDQP
272- 288 (22.26/ 8.31) QQGSLPnmQNNVLSSRP
---------------------------------------------------------------------------
|