<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32194

Description Uncharacterized protein
SequenceMVMMAEGDRRDESVAVAVAIDRGKGSQAAMKWAVDSLLTPGETLTLIHVRVKQTNPNNGTNPNKCGDDYVKELFLPFRCFCTRKDINCEDVVLEGVDAGKGIIEYVQENAIDILVLGASKMTLLKRFKAVDVTSSVMKGAPNFCTVYSISRGKISSVRPATSSPPPLCTIRPHLPGRSSKANNNNNIPKVERRYQPVQSKQEEIDIKYPYLRRGYEGTDRASMADSDLSTMSSGRPSMDWLLPTPRLSVSSEFEDNRCSFATSSCSSEKQSIDLCSTYSAFSSSSPESGRLSSVSMYSQDDVEAEMKRLKLELKYTMDMYNTACKEAITAKKTTMELHKWKLERECKLKQARLAKEAAMEMVNNEKAKSRAAMEALATAHRMVEIEAQKRKQIEMAALRDVEDNNKARYSLNKSDKMYRKYTIEEIDKATKSFSNTHKIGEGGYGPVFKGVLDYTPVAIKVLRPDAINGRSQFQQEIDVLTSIRHPNLVLLLGACAEYGCLAYEYMANGSLEDHLLRRGNYPVLSWQLRFRIAAEIATCLNFLHQLKPEPLVHRDLKPANILLDQHMVSKIADVGLARLVPHSVNDIAIQYRITSTAGTLCYIDPEYQQTGMLGTKSDIYSFGIMLLQILTAKPPMGLTSQVERAIEERKFAEILDPVVLDWPLAETLILAKIGLHCASLSRKDRPNLGKDVLPKIIRLIDLAGESMHNNHIQVNASKKASFYF
Length724
PositionTail
OrganismCapsella rubella
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Capsella.
Aromaticity0.06
Grand average of hydropathy-0.338
Instability index47.39
Isoelectric point8.70
Molecular weight80955.27
Publications
PubMed=23749190

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32194
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     172.03|      57|      61|     528|     586|       1
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  528-  586 (85.18/65.48)	LRFRIAAEIATcLNFLH.QLKPEPLV..HRDLKPANILLDQHMVSKiADVGLARLVPHSVND
  589-  648 (86.85/56.73)	IQYRITSTAGT.LCYIDpEYQQTGMLgtKSDIYSFGIMLLQILTAK.PPMGLTSQVERAIEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      70.59|      16|      17|     264|     279|       3
---------------------------------------------------------------------------
  264-  279 (27.24/14.61)	SCSSEKQSIDLCSTYS
  283-  298 (26.15/13.78)	SSSPESGRLSSVSMYS
  301-  315 (17.20/ 6.94)	DVEAEMKRLKLELKY.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      53.39|      18|      19|     358|     376|       4
---------------------------------------------------------------------------
  358-  376 (26.62/23.50)	AMEMVNNEkAKSRAA..MEAL
  379-  398 (26.76/17.97)	AHRMVEIE.AQKRKQieMAAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.55|      19|      19|     177|     195|       6
---------------------------------------------------------------------------
  177-  195 (31.87/22.43)	RSSKANNNNNIPKVERRYQ
  198-  216 (32.68/23.19)	QSKQEEIDIKYPYLRRGYE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32194 with Med32 domain of Kingdom Viridiplantae
Unable to open file!