<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32185

Description Uncharacterized protein
SequenceMKAQKGNSKKKSSNSGLVAVAVDNNKGSQHALKWAADNLVSKGQTIILLHVILRSSSDSGDNTEKHKQAESLFVTFHCYCSRKEIQCLDVTLEDDNIVKSLAEYVSSGVIENLVLGAPSRHGFMRKFKISDTPSNVTKAAPDFCTVYVISKGKISSVRYATRAAPYRSPLIGQIENHSEICNYEKFRNTMSFRDRTPARSSTASSIEDYGKSPLARTPNYANSFYDLSDSENDISFVCSGRPSTTSSGRRSTASSGRPSTTGSGRPSTSTGRSDISFVSSGRPSTSTTGSPSFFYDFPDSGLTPRMSTSSGHSMRLGIRFNDTNIQHDFSFVSQDSGRSSCSCSPQNLEEVEAEMRRLKQELKQTIDMYGSACREALAAKQEAKELQRQKMEEEGWVQEGQLSEKSTKSIVEKERANKAAMEASETASKIADLETQRRAIEAAGSLSDSNLRYRRYVISKIEEATNSFDEANKIGEGGYGPVYKGYLDHTPVAIKVLRPDAAQGRSQFQREVEVLSCIRHPHMVLLIGACPEFGVLVYEYMAKGSLADRLYKYENTPPLSWELRFRIAAEVATGLLFLHQTKPEPIVHRDLKPGNILIDQNYVSKIGDVGLAKLVPAVAENVTQCLVTSTAGTFCYIDPEYQQTGMLGVKSDVYSFGILLLELLTAKRPTGLAYTVEQAMEQGTFKDMLDPVVPNWPVEEALSLAKVALKCAQLRRKDRPDLGKEVLPELNKLRARADANMDWMMFNLSRGLTPNHSQVSLPTVDELSICSDSSNAHSSTLSDTEKNSDPNEE
Length793
PositionTail
OrganismCapsella rubella
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Capsella.
Aromaticity0.07
Grand average of hydropathy-0.481
Instability index49.19
Isoelectric point6.95
Molecular weight87416.34
Publications
PubMed=23749190

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32185
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      71.67|      21|      22|     239|     260|       1
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  245-  267 (38.95/20.26)	TSSGRR..STASSGRPSTtgSGRPS
  268-  292 (32.72/12.02)	TSTGRSdiSFVSSGRPSTstTGSPS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.16|      15|      22|     126|     141|       2
---------------------------------------------------------------------------
  126-  141 (22.29/18.17)	KFKISDTpSNVTKAAP
  151-  165 (26.87/16.08)	KGKISSV.RYATRAAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.13|      34|      41|     166|     202|       3
---------------------------------------------------------------------------
  166-  202 (53.47/50.97)	Y.RSPLiGQIENHSE.ICNYEKFRNTMSFrdRTPARSST
  209-  244 (54.66/39.68)	YgKSPL.ARTPNYANsFYDLSDSENDISF..VCSGRPST
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|      90.18|      19|      20|     432|     450|       4
---------------------------------------------------------------------------
  385-  401 (20.85/10.67)	..ELQRQKM....EEEGWVQEGQ
  409-  427 (23.33/12.77)	SIVEKERAN....KAAMEASETA
  432-  450 (29.48/18.00)	DLETQRRAI....EAAGSLSDSN
  451-  472 (16.52/ 6.99)	.LRYRRYVIskieEATNSFDEAN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     114.66|      37|     447|     301|     340|       5
---------------------------------------------------------------------------
  301-  340 (54.18/42.07)	GLTPRMSTSSGHSM.RLGIrFNDTNIQHDfSFVSqDSGRSS
  751-  788 (60.48/33.50)	GLTPNHSQVSLPTVdELSI.CSDSSNAHS.STLS.DTEKNS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32185 with Med32 domain of Kingdom Viridiplantae
Unable to open file!