<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32184

Description Uncharacterized protein
SequenceMWLAKNNNVGVKEGGTTGVVAVAIDKDKSSQLALKWAVDNLLQRGQSVILVHVKLRPSPLTNSPSLHASSAKLSQESSLVCRDPEGLSKELFLPFRCFCTRKDIQCQDVLLEETDVAKALVEYANQAAIEVLVVGSSNKGGFLRFNKPTDIPGTITKSAPDFCTVYVISKGKIQTMRSASRSAPMTAPLRNPVQPPSLKPPQPMPSTSTNTMRAERRSFESQQRRSVEDPQRRSMEDLQRRSVEDLQRRSMEDLQRRSMDDQSESFRSPFTRRGNGRSYGDLSVPESDISFISSGRPSIDRIFPSLYDNNNDPNRTPPRLSNFSDMDYGSNFDQSSNYGRRSVDMSSPTNMSTGSFENERFSSASQSIDDVEAEMRRLKLELKQTMEMYSTACKEALTAKQKATELQRWKLEEERKLEEARLAEEAALAIAEKEKAKSKAAIEAAEAAQRIAELESKKRVNAEMKALQESEEKTKALTALANSDVRYRKYSIEEIESATEYFAEKYKIGEGGYGPVYKCYLDHTPVAVKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPECGCLVYEFMANGSLEDRLFRLGNSPPLSWQMRFRIAAEIGTGLLFLHQAKPEPLVHRDLKPGNILLDRNFVCKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITAKPPMGLTHYVERALEKGTLADLLDPAVPDWPVEDTAKFAKLALKCSELRRKDRPDLAKVILPELNRLRTLADETTDSVVFNNSPEPSTTDMKLEQMSGASISVPQ
Length806
PositionTail
OrganismCapsella rubella
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Capsella.
Aromaticity0.06
Grand average of hydropathy-0.497
Instability index60.16
Isoelectric point7.05
Molecular weight90000.33
Publications
PubMed=23749190

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32184
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      92.82|      23|      23|     215|     237|       1
---------------------------------------------------------------------------
  215-  237 (44.46/24.47)	ERRSFESQQR..RS..VEDPQRRSMED
  239-  253 (21.00/ 7.83)	........QR..RS..VEDLQRRSMED
  255-  281 (27.37/12.35)	QRRSMDDQSEsfRSpfTRRGNGRSYGD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.82|      30|      35|     374|     403|       2
---------------------------------------------------------------------------
  374-  403 (51.58/32.59)	EMRRLKLELKQTMEMYSTACKEALT......AKQKA
  405-  440 (42.24/25.48)	ELQRWKLEEERKLEEARLAEEAALAiaekekAKSKA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.61|      24|     501|     141|     167|       3
---------------------------------------------------------------------------
  141-  167 (37.57/34.99)	GFLRFNKPTdIPGTITK.....SAPDFCtvYV
  644-  672 (38.04/23.62)	GLARLVPPS.VADTVTQyrmtsTAGTFC..YI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      80.33|      22|      22|     308|     329|       4
---------------------------------------------------------------------------
  308-  329 (41.42/30.13)	DNNNDPNRTPPRLSNFSDMDYG
  333-  354 (38.91/27.77)	DQSSNYGRRSVDMSSPTNMSTG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.25|      13|      26|     174|     187|       5
---------------------------------------------------------------------------
  174-  187 (19.10/16.67)	QTMRSASrSAPMTA
  202-  214 (25.15/16.46)	QPMPSTS.TNTMRA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32184 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DRIFPSLYDNNNDPNRTPPRLSNFSDMDYGSNFDQSSNYGRRSVDMSSPTNMSTGSFENERFSSASQSI
2) MRSASRSAPMTAPLRNPVQPPSLKPPQPMPSTSTNTMRAERRSFESQQRRSVEDPQRRSMEDLQRRSVEDLQRRSMEDLQRRSMDDQSESFRSPFTRRGNGRSYGDLSVPESDISF
3) TDSVVFNNSPEPSTTDMKLEQMSGASISVPQ
300
176
776
368
291
806










Molecular Recognition Features






MoRF SequenceStartStop




1) IDRIFPSL
299
306