<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32177

Description Uncharacterized protein
SequenceMVKISEKGEENVTLAVDKDKESQNVMKWAVNNLLSRGQTITLLHVKLKQSSSLPYSGSNLNKPNDDVSEFFLPFRCYCARKDINCQDVVVEDVSAAKGILDYVEQHGIETLVLGSSKMNLLRRFKAADVSSTVMKKAPSFCKVYVISKGKISSLKSATTSPPSSTMRYHVNAQMGNLNVERRQETMQREQDEIKIEMKSPFSRREYESIYQPSITESDISFVSSGRPSMDQMFPSLYENVDITWLSVGSEYGKNRSSFATSYSSGKESIDLTSPYAEHSSSSLESGRQSFSLQCQDEMEAEMRRLKMELKYTMEMYNSACKEAISAKKAANELYKWRADKEHKLEEVRLAKEAAMAMAESEKERSRAAMEAAMAAKKVSELEAEKRKHIESIEGKKRAMSSSKQTDLRYRKYSIEEIEEATKDFSPSHKIGEGGYGPVFKGTLDYTKVAIKVLRPDAAHGRSQFQQEVEVLTCMRHPNMVLLLGACPEYGCLVYEYMANGSLEDCLFRRGNSPTLSWQLRFRITAEIATGLHFLHQMKPEPLVHRDLKPGNILLNQHFVSKISDVGLARLVPPSVADTATQYRMTTTAGTFFYIDPEYQQTGMLGTKSDIYSFGIMLLQILTAKPPMGLTHHVERAIEKGTFAEMLDPTVPDWPLEEALVAAKLALQCAELRRKDRPDLGNVILPLQYGYDNSSFHHSSTS
Length701
PositionTail
OrganismCapsella rubella
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Capsella.
Aromaticity0.08
Grand average of hydropathy-0.476
Instability index51.33
Isoelectric point7.25
Molecular weight78954.17
Publications
PubMed=23749190

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32177
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      96.24|      23|      23|     249|     271|       1
---------------------------------------------------------------------------
  226-  242 (22.85/11.55)	......RPSMDQMFPSLYENVDI
  249-  271 (39.65/25.58)	SEYGKNRSSFATSYSSGKESIDL
  273-  292 (33.75/20.66)	SPYAEHSSS...SLESGRQSFSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.62|      20|      22|     385|     404|       2
---------------------------------------------------------------------------
  385-  404 (32.79/23.13)	KRKHIESIEGKKRAMSSSKQ
  410-  429 (33.83/24.11)	RKYSIEEIEEATKDFSPSHK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.13|      17|      21|     338|     356|       4
---------------------------------------------------------------------------
  338-  356 (24.76/23.50)	ADKEHklEEVRLAKEAAMA
  358-  374 (29.37/20.38)	AESEK..ERSRAAMEAAMA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.10|      14|     410|     150|     163|       6
---------------------------------------------------------------------------
  150-  163 (24.88/17.49)	KISSLKSATTSPPS
  561-  574 (25.22/17.83)	KISDVGLARLVPPS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32177 with Med32 domain of Kingdom Viridiplantae
Unable to open file!