<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32167

Description Protein kinase superfamily protein
SequenceMSARRVRRTSEDYGSITAIAIDKDKNSQHALKWAVENIVADAPQCVLIHVQLGDTGGHFHQDNPDEAHEFFLPFRGFCARKGIIAKEVILHDIDISNAIVNYITNNYYIANLVVGASARNSFLKKFQSPDVPTTLLKTTPETCAVFVVTKGKLLKSRSASHRHKLSRQQNLSSLLYNSTNSIDSDSASISSPVSTQTNKPNSNFFQPNSPRISTPQSMSEISQSETDNGSCDMVSTVSSYTVSDSSTTIGSSISSTSTESPLVGNYVEQQNQNLEAEVRRLRLELKQFNKDKDTTNQKENSQETPWSDEKIELPRALSDRETQKTQSAAFQAAEIAKRIAKMESQKRRLLEMQANLDKQMMFTTVSYRRYSIKDVEDATYGFSDALKIGEGGYGPVYKAVLDYTSVAIKILKSGITEGLKQFQQEIEVLSSMRHPNMVILLGACPEYGCLVYEYMENGTLEDRLFCKNNTPPLSWRARFRIASEIATGLLFLHQAKPEPLVHRDLKPANILLDKHLTCKISDVGLARLVPPAVADTYSNYHMTSAAGTFCYIDPEYQQTGMLGVKSDLYSFGVVLLQIITAQPAMGLGHKVEMAVENNNLREILDPTVSEWPEEETLELAKLALQCCELRKKDRPDLALVLLPALNRLKEFATEDHERIQDRTSHVSHEHNSVPLSPIPSSQVSFLEPFFLRDISCK
Length697
PositionTail
OrganismArabidopsis thaliana (Mouse-ear cress)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
Aromaticity0.07
Grand average of hydropathy-0.389
Instability index45.35
Isoelectric point6.18
Molecular weight77917.34
Publications
PubMed=11130712
PubMed=27862469

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32167
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.94|      23|     161|     451|     473|       3
---------------------------------------------------------------------------
  451-  473 (45.14/36.81)	VYEYMENGTLE.DRL...FC...KNNTPPL
  608-  637 (29.80/21.47)	VSEWPEEETLElAKLalqCCelrKKDRPDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.93|      15|      15|     171|     185|       5
---------------------------------------------------------------------------
  171-  185 (24.70/15.17)	LSSLLYNSTNSIDSD
  189-  203 (26.23/16.56)	ISSPVSTQTNKPNSN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      39.71|      13|     294|     227|     248|       7
---------------------------------------------------------------------------
  212-  225 (18.37/19.18)	ISTPQSMSeISQSE
  234-  246 (21.34/ 8.77)	VSTVSSYT.VSDSS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32167 with Med32 domain of Kingdom Viridiplantae
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