<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32162

Description Serine threonine kinase
SequenceMGRSYLEGGRDAGADLGYPLVAVCIDKDKNSQNALKWAIDSLVQKGQTIVLVHVNTKGTSGGVEDAAGFKQPTDPHMKDLFVPFRCFCTRKDINCKDVVLDEHDVAKSIIEFSAQAAVEKLVLGATTRGGFVRFKADIPTTISKGAPDFCSVYIVNKGKVSSQRNSTRAAPRVSPLRSQIQSSQIAATLKPEPPQSHRWSSSSRGHEHGETPRVDNFRSPFARGGPANTRKSYADLSHMSMPDSADISFVSSTGRRSVDHHPAIPPRMSNGSVDSYDHSFEMSRTPSKWGGDSFGGMDHTTFSQSSSSSFCSLGMQDDVEAEMKRLRLELKQTMDMYSTACKEALTAKQKAMELQRWKMEEEQKTQDSRITEDSAMAMIEREKARAKAAMEAAEASQRIAEMEVQKRISAEKKLLKEAEERKNRGGSGMSHEARYRRYSIEEIEQATDNFNDARKVGEGGYGPVYKGFLDHTQVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMASGSLDDCLFRRSGGAGGPVIPWQHRFRICAEIATGLLFLHQTKPEPLVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDVYSFGVMLLQIITAKPPMGLSHHVGRALERGELQDMLDPAVPDWPLEEAQCLAEMALRCCELRRKDRPDLGAVVLPELNRLRALGEDNMQYCGAIIRGGGGGGGMHSSSPFHSNISRSHAEMMIDSQYPRSVFSSRAGDSPMPPRRSNA
Length787
PositionTail
OrganismZea mays (Maize)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> PACMAD clade> Panicoideae> Andropogonodae> Andropogoneae> Tripsacinae> Zea.
Aromaticity0.06
Grand average of hydropathy-0.493
Instability index53.60
Isoelectric point8.03
Molecular weight86834.51
Publications
PubMed=19965430

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32162
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     145.70|      36|      38|     161|     197|       1
---------------------------------------------------------------------------
  161-  196 (58.97/27.88)	SSQRNSTRA.APRVSPLRSQIQSSQIAATLKPEPPQS
  201-  237 (56.13/27.39)	SSSRGHEHGeTPRVDNFRSPFARGGPANTRKSYADLS
  747-  769 (30.60/12.27)	..............SPFHSNISRSHAEMMIDSQYPRS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.63|      28|      28|     308|     335|       2
---------------------------------------------------------------------------
  308-  335 (48.35/34.73)	SSFCSLGMQDDVEA.EMKRLRLELKQ.TMD
  338-  367 (39.28/26.85)	STACKEALTAKQKAmELQRWKMEEEQkTQD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     173.88|      49|     166|     507|     555|       3
---------------------------------------------------------------------------
  507-  555 (93.24/62.27)	LLLGACPEYGCLVYEYMASGSLDDCLFRRSG..GAGGPVIPWQHRFRICAE
  674-  724 (80.64/52.78)	MLDPAVPDWPLEEAQCLAEMALRCCELRRKDrpDLGAVVLPELNRLRALGE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.36|      23|      28|     369|     394|       4
---------------------------------------------------------------------------
  369-  394 (32.65/32.78)	RITEdsaMAMIEREKARAKAAMEAAE
  398-  420 (36.71/26.86)	RIAE...MEVQKRISAEKKLLKEAEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.83|      19|      61|      15|      33|       6
---------------------------------------------------------------------------
   15-   33 (34.51/26.00)	DLGYPLVAVCIDKDKNSQN
   79-   97 (38.32/29.73)	DLFVPFRCFCTRKDINCKD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.67|      13|     515|     256|     270|       8
---------------------------------------------------------------------------
  256-  270 (19.06/16.37)	RSVDhHPaIPPRMSN
  774-  786 (27.62/13.33)	RAGD.SP.MPPRRSN
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32162 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AMELQRWKMEEEQKTQDSRITEDSAMAMIEREKARAKAAMEAAEASQRIAEM
2) QRNSTRAAPRVSPLRSQIQSSQIAATLKPEPPQSHRWSSSSRGHEHGETPRVDNFRSPFARGGPANTRKSYADLSH
3) SADISFVSSTGRRSVDHHPAIPPRMSNGSVDSYDHSFEM
351
163
244
402
238
282










Molecular Recognition Features






MoRF SequenceStartStop




NANANA