<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32158

Description At3g20200
SequenceMKAQKGSSKKKGTNSGLVAVAVDNNKGSQHALKWAADHLVSKGQTIILLHVILRSSSDSGEITAEKHKQAENLFVTFHCYCSRKEIQCLDVTLEDDNIVKSLAEYVSSGVIENLILGAPSRHGFMRKFKISDTPSNVAKAAPDFCTVYVISKGKISSVRHASRAAPYRSPLMGQIENHSEIINYEKFRNTMSFRDRAPPRSSTASSIEDYGKSPMARTSNYANSFFDLEDSENDISFVCSGRPSTASSGRPSTSTGRSDISFVSSGRPSTSTTGSPSFIYDFPDSGLTPRESTSSGHSMRLGIRFNDTNIQHDFSFVSQDSGRSSCSCSPQNLEEVEAEMRRLKQELKHAIDMYGSACREALAAKQEAKELQRQKIEEEGWVQEGQLSEKSTKSIVEKERAHKAAKDASETAGKIAELETQRRAIEAAGSFSDSSLRYRRYVIGEIEEATNSFDKANKIGEGGYGPVYKGYLDHTPVAIKALKADAVQGRSQFQREVEVLSCIRHPHMVLLIGACPEYGVLVYEYMAKGSLADRLYKYGNTPPLSWELRFRIAAEVATGLLFLHQTKPEPIVHRDLKPGNILIDQNYVSKIGDVGLAKLVPAVAENVTQCHVSSTAGTFCYIDPEYQQTGMLGVKSDVYSFGILLLELLTAKRPTGLAYTVEQAMEQGKFKDMLDPAVPNWPVEEAMSLAKIALKCAQLRRKDRPDLGKEVLPELNKLRARADTNMEWMMFNLSRGRLTPNHSQVSLPPVDELSVCSDKSYTHSSTVSDTEKNSDQNEED
Length780
PositionTail
OrganismArabidopsis thaliana (Mouse-ear cress)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> eudicotyledons> Gunneridae> Pentapetalae> rosids> malvids> Brassicales> Brassicaceae> Camelineae> Arabidopsis.
Aromaticity0.07
Grand average of hydropathy-0.484
Instability index46.96
Isoelectric point6.87
Molecular weight86190.16
Publications
PubMed=11130713
PubMed=27862469

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
hydrolase activity	GO:0016787	IEA:UniProtKB-KW
protein serine/threonine kinase activity	GO:0004674	IDA:TAIR

GO - Biological Process
protein autophosphorylation	GO:0046777	IDA:TAIR









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32158
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      97.89|      19|      22|     234|     252|       1
---------------------------------------------------------------------------
  234-  252 (39.69/20.98)	DISFVC..SGRPSTASSGRPS
  259-  277 (37.45/19.42)	DISFVS..SGRPSTSTTGSPS
  313-  329 (20.75/ 7.76)	DFSFVSqdSGRSSCSCS....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.76|      15|      22|     127|     142|       2
---------------------------------------------------------------------------
  127-  142 (21.44/14.23)	KFKISDTpSNVAKAAP
  152-  166 (26.32/12.72)	KGKISSV.RHASRAAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.51|      27|     268|     167|     197|       3
---------------------------------------------------------------------------
  167-  195 (44.90/34.49)	YRSPLMGQIENH..SEIINYEKFRNtmSFRD
  199-  227 (43.60/21.43)	PRSSTASSIEDYgkSPMARTSNYAN..SFFD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      57.18|      14|      21|     418|     431|       4
---------------------------------------------------------------------------
  370-  382 (16.15/ 7.70)	.ELQRQKI....EEEGWV
  418-  431 (24.46/15.24)	LETQRRAI....EAAGSF
  436-  453 (16.57/ 8.08)	LRYRRYVIgeieEATNSF
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32158 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) FVCSGRPSTASSGRPSTSTGRSDISFVSSGRP
2) PNHSQVSLPPVDELSVCSDKSYTHSSTVSDTEKNSDQNEED
3) TGSPSFIYDFPDSGLTPRESTSSGHSMRLGIR
237
740
273
268
780
304










Molecular Recognition Features






MoRF SequenceStartStop




NANANA