<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32149

Description Os07g0681500 protein
SequenceMVPAGGGGGELERRVMAALKASEARGDQPLVWAVEVARVVAGEGAGLPSADLAGILVSNLCFAHNSPSLWKLVGHAVASRLLCPLHVLALLTPRVLPQRRAQPEAYRLYLELLRSNVTSSFLSMEAGPNRDKITKSIDDALQLSKIYGFSGIDNGHVIIFFMMFVITKLIDCTLEDCGFPSGLTEEQGSIYAIEGPQDMDLDVKGVSTEKQNEHRAQLRRKNTVMALDVLIMMVADRKIQSFLRLIFLNMPEKFSVLSQRLSLVEAHKMELETLLTANHKIDDLLMNMWRVSNTAYQPNNKRLLGVLGNMKYGGSMLGQFTGAGRAACWVIFDIYVENAIDGKHLSAISAIEVLKEMTKTLQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDSRLCMLLALIPLSIGAILKEETDVHGAQGSKSLPKTSGLVSSLQDLIQYSGLLVPPSSVVNAANAAASKAAAFKANYKSGGGNPGMMGQNDSSTKTVGNMLHLIVEACISRNLIDTSSYLWPGYVVSSGHLKDATLPQESPWLNFMQGAPLSGPLIDALIATPASSTTELDRLYHIALNGSEEEKSAAAKILCGASFVCGWNIQEYVVRMVVKLLSPPLPSNSSTQGSMSHYLAQMSTLNALLLGISYGDAIHIISLYGMVPDVAAALMPICEVFGSIPPPSNHKPAIVGEISVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVRLELTLDYLLLMRNNHIDFANSSASSRNSSNNIGPLNEVPAQPLYIDSFPKLRAWYFQNQACIASTLSGLCNKNPVHQVANKILSMICRKMNKPVVSSGNLSSTSSSSVSGSSVSTPDDYQRPTVPAWEFLEAVPFVLEAVLTACAHGRFSSRDLTTSLRDLVDFLPASIAAIVSYFLAEITRGIWKMVPMNGTEWPSPGASLHSIEAEIKEILASAGIQIPSCYPRGVPPMLPLPMAALVSLTITFKLDKSSEYIHAISGQALENCAGGSSWPSMPIIAALWTQKVRRWHDFIILSCLRSPFGRDKDAVAQLIQSCFSSFLRSSCSGSDFTANRGVGALMGDAITGQGLQLPMAPGFIYLRTCRTFHDTYFVSEVILKQVIEWADKLANGFSSSGPPQLKSGRTPLSSAACMAHQVAMLGGGLLCVAGGPLLVQVLYEETLPTLLLSAREESMKDPGPVSSTLQGYAMANMLFFCGSLLWGAERTSPVMKLSFLSRRPRVVGNHMDFMAGVLDGHILLGCDHGTWKAYVSRFVFLVVKFVPSWLRDIKLDTLKKIASGLRSWNEHDLALALLERGGPQAISTVVDTLL
Length1315
PositionTail
OrganismOryza sativa subsp. japonica (Rice)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza> Oryza sativa.
Aromaticity0.07
Grand average of hydropathy0.147
Instability index47.92
Isoelectric point7.87
Molecular weight142706.87
Publications
PubMed=16100779
PubMed=24280374

Function

Annotated function 
GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32149
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     164.46|      48|     187|     102|     156|       1
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  102-  156 (76.99/62.78)	QPEAYRLYLELLRSNVTSSFLSMEAGPNRDKITKSIDdalqlskIYGFSGIDNGH
  297-  344 (87.48/56.94)	QPNNKRLLGVLGNMKYGGSMLGQFTGAGRAACWVIFD.......IYVENAIDGKH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     259.37|      82|     563|     614|     711|       2
---------------------------------------------------------------------------
  616-  707 (125.15/89.06)	PPLPSNSSTQGSMSHYLAQMSTLNALLLGISyGDAIHIISLYG.MVPDVaaaLMPICEvfGSIPPPSNHKPAIVGeisvYSVFSCAFLCLLRL
 1124- 1206 (134.22/69.59)	PQLKSGRTPLSSAACMAHQVAMLGGGLLCVA.GGPLLVQVLYEeTLPTL...LLSARE..ESMKDPGPVSSTLQG....YAMANMLFFCGSLL
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     131.96|      46|     558|     390|     441|       3
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  390-  441 (57.75/61.61)	PlEGPIPHLDsrLCMlLALIPLSIGAILKEETD.VHGAQGsKSLPKTSGlVSS
  952-  998 (74.22/49.20)	P.RGVPPMLP..LPM.AALVSLTITFKLDKSSEyIHAISG.QALENCAG.GSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     239.12|      77|     591|     444|     528|       4
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  444-  528 (118.30/100.28)	DLIQ..YSGLLvpPSSVVNAANAAASKAAAFKANYKSGGG.....NPGMMgqndsSTKTVGNMLH.LIVEACISRNLIDTSSYLWPGYvVSSG
 1038- 1122 (120.82/79.85)	QLIQscFSSFL..RSSCSGSDFTANRGVGALMGDAITGQGlqlpmAPGFI.....YLRTCRTFHDtYFVSEVILKQVIEWADKLANGF.SSSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.07|      20|     557|       3|      23|       5
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    3-   23 (30.62/23.66)	PAgGGGGELERRVMAALKASE
  562-  581 (35.44/22.15)	PA.SSTTELDRLYHIALNGSE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     198.74|      63|     374|     847|     912|       6
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  847-  912 (95.09/74.88)	QRPTVpAWEFLEAVPFVLE.aVLTACAHGRFSSRdLTTSLRDLVDFLPASIAAIVSYFLAEITRGI..W
 1223- 1289 (103.65/67.12)	RRPRV.VGNHMDFMAGVLDghILLGCDHGTWKAY.VSRFVFLVVKFVPSWLRDIKLDTLKKIASGLrsW
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32149 with Med33 domain of Kingdom Viridiplantae
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