<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32119
Description |
"Transcription elongation factor A (SII), 3" |
Sequence | MTREEDLLRIAKKLDKMVSRNNMDGALDLLRELKDFNMTLKLLQDTRIGMSVNGIRKHCTDEDVVNLAKILIKNWKRLLESAQNPKSERPNEVKNGSHPSKPSGSPSRTSPEKDSRKDAPVDFFPPPSINSHPPLRRSSVDVKRKDSTDSKKPLPRKPSLDGRRDSKDSTDSKSSNHLLKRQSSEPKLERRDSTNSRSGSSPQAKKSCESKSKPETPKTPTTPTSPLSPSFSSSAGPLSPRLQTGDSIRDKCIEMLTAALRTDDDYKDYGTNCEAMGAEIEDYIYQETKATDMKYKNRVRSRISNLKDPKNPNLRKNVLAGAIELSRIASMTAEEMASDELKQLRNVLTQEAIREHQMAKTGGTTTDLLQCGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRWKFC |
Length | 409 |
Position | Unknown |
Organism | Danio rerio (Zebrafish) (Brachydanio rerio) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Actinopterygii> Neopterygii> Teleostei> Ostariophysi> Cypriniformes>
Danionidae> Danioninae> Danio.
|
Aromaticity | 0.03 |
Grand average of hydropathy | -1.011 |
Instability index | 60.71 |
Isoelectric point | 9.44 |
Molecular weight | 45922.49 |
Publications | PubMed=23594743
|
Function
Annotated function |
|
GO - Cellular Component | nucleus GO:0005634 IEA:UniProtKB-SubCell
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GO - Biological Function | translation elongation factor activity GO:0003746 IEA:UniProtKB-KW
zinc ion binding GO:0008270 IEA:InterPro
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GO - Biological Process | regulation of transcription, DNA-templated GO:0006355 IEA:InterPro
transcription, DNA-templated GO:0006351 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP32119
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 79.60| 21| 21| 131| 151| 1
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131- 150 (33.79/17.03) ..SHP.PL.RRSSVDVK..R..KDSTDS
151- 172 (19.91/ 7.07) K....kPLpRKPSLDGR..RdsKDSTDS
173- 196 (25.90/11.37) KsSNH.LL.KRQSSEPKleR..RDSTNS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 69.77| 20| 20| 72| 91| 3
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72- 91 (34.57/17.55) IKNWKRLLESAQNPKSERPN
93- 112 (35.20/18.00) VKNGSHPSKPSGSPSRTSPE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 57.78| 17| 21| 201| 218| 5
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201- 218 (26.83/17.19) SPQAkKSCESKSKPETPK
225- 241 (30.95/15.84) SPLS.PSFSSSAGPLSPR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 52.82| 14| 27| 366| 379| 6
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366- 379 (27.63/19.83) TDLLQCGKC..KKKNC
394- 409 (25.20/17.44) TTFVLCNECgnRWKFC
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