<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32112

Description YALI0F11319p
SequenceMPSKWVQLGSTFEAIVSDSESTRVRNEALVISDTPKTRRTRNKQAVIISILDAARAPFDKTLFNQIVDTRADFGTIIQTILAWAVSDSRVSVERVFIASHLVSQLSEGVDGDAVPSHIVQFLLSVKSHLDVRIDDLYALVTELCVLDIFQPQDYVRSLISSGVLYISRLSEWANVQLDILGNLPLVAVPSSCQVQVRYMVRKVAKYASYNENELLERTNNALRVLLPGVFDSQAEDVDMSSSSSSLSDSTNIPYSEFTQNTRIVVAENLYTSLCAAVERGYVPTTQEFAQYQLILENLHAWRLMCASIQLIVPKCTQSHLLYFLASATRYQWQAFACIADMPALVKVFMHQYRGLRKVRVSRELWDLVQFSAQQLPELKPELETLLKNSSSPQLSPISEVTPQTDSEATKDVNLPQALNDLLLHSSDVRTSCKMLANYKDDSQFSNQLMTWLRDQEVSLQLLQTLVFLVVYECTCIEKVGDLFLQIHNLRDMSGGSRLLLSLIARDLTQEYSLSTTEAFSLQFQRKLFADQHPRIYLRLVAQYLFEREVFQDPQWLDDVDTFCKEVAVHHPALFSQLIVDPVIEPDNAVAASSLQQLLNHLLKLDLGTGTSLADDLQQLITHVTPFNMFLAQTQLRLLFAHRGRISKDPVAMDTSPELTINSTTPSTDTTDEDVSVLFRVLSDPGLLKLPPFFGDLFSELPGELKGRILARAETTFLTSPNFPRVGEDNIVSLLIELADSLADSVTEDVCKTQTFALSSGLQRLVEASVREPHPPGLAEGISMFLKIAMIHEKSLMASEDAEVTMLRNHVVEGLQALLDSPFVATTPDLKATLQDTWTALKSELSEVAEPANSAPSKAGPTRDLLLYSTANDAFSEVTVRSFDLLEESNPTMGVNDAALNLALFNATIEKRM
Length912
PositionKinase
OrganismYarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Dipodascaceae> Yarrowia.
Aromaticity0.07
Grand average of hydropathy-0.011
Instability index43.65
Isoelectric point4.88
Molecular weight101735.83
Publications
PubMed=15229592

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32112
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.36|      23|      39|     576|     600|       1
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  576-  600 (30.24/30.77)	QLIVDpViEPDNA.VAASSLQQLLNH
  618-  641 (37.11/25.23)	QLITH.V.TPFNMfLAQTQLRLLFAH
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     294.52|      99|     127|      94|     206|       2
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   94-  206 (140.73/130.44)	RVFIASHLVSQlSEGVDGDAVPSHIVQFLLSVKSHL..DVRI...DDLYalvTELC..VLDIFQP..QDYVRSLissgvLYISRLSEWanvQLdILGNLPLVaVPSSCQVQVRYMVRKVAKY
  223-  330 (153.79/102.08)	RVLLPGVFDSQ.AEDVDMSSSSSSLSDSTNIPYSEFtqNTRIvvaENLY...TSLCaaVERGYVPttQEFAQYQ.....LILENLHAW...RL.MCASIQLI.VPKCTQSHLLYFLASATRY
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.80|      18|      36|     378|     395|       3
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  378-  395 (29.67/20.07)	LKPELETLLKNSSSPQLS
  414-  431 (30.13/20.50)	LPQALNDLLLHSSDVRTS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.66|      11|      36|     497|     507|       4
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  497-  507 (17.50/10.47)	RLLLSLIARDL
  534-  544 (19.16/12.17)	RIYLRLVAQYL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.28|      15|      31|     676|     692|       5
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  676-  692 (22.62/16.62)	VLFRvlSDPGLLKLPPF
  708-  722 (25.67/12.94)	ILAR..AETTFLTSPNF
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32112 with Med12 domain of Kingdom Fungi
Unable to open file!