<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32111

Description DEHA2A14036p
SequenceMNLEEKLNNSLNDILKSSGYIFEIIHSRKKQSNLITGTNNQLITPVITSQLTNSITKFEDILDDTICKFNDTKWCVEQMLQNRQKQEELKLKEEEEKQRRIKEDDERKRLEEEKTKKRKKEEEEARIKKEKEDQQAKEEELKKKKEQEQKEKEQKERESLKENEKKSDANNDNFDTFMSPSFEFNLNDLPTTNERGIDIPNPSDILSTISYDGFAESKDSKKADTNIPNDESNNNNDLDLDMNNLLDNDASLLDGLDMNMLDQGFDGTNPNGNGVNDLQDEEFDVDNFLNQFGAD
Length295
PositionTail
OrganismDebaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes> Saccharomycetales> Debaryomycetaceae> Debaryomyces.
Aromaticity0.05
Grand average of hydropathy-1.333
Instability index45.56
Isoelectric point4.56
Molecular weight34330.22
Publications
PubMed=15229592

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32111
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      62.78|      16|      16|     120|     135|       1
---------------------------------------------------------------------------
  114-  130 (19.22/ 6.74)	KTKKRkKEEEEARIKKE
  131-  146 (20.41/ 7.62)	KEDQQaKEEELKK.KKE
  150-  165 (23.15/ 9.63)	KEKEQ.KERESLKENEK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.43|      14|      15|     255|     269|       2
---------------------------------------------------------------------------
  237-  250 (20.78/ 7.55)	DLDLDM.NNLLDNDA
  255-  269 (22.65/12.53)	GLDMNMlDQGFDGTN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.04|      16|      16|      81|      96|       3
---------------------------------------------------------------------------
   81-   96 (25.78/13.80)	QNRQKQEELKLKEEEE
   98-  113 (26.25/14.18)	QRRIKEDDERKRLEEE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32111 with Med2 domain of Kingdom Fungi
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