<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32108
Description |
Expressed protein |
Sequence | MSGFNRMGSDGNFGKGPRELTGAVDLISRYKLLNHHSFFCKKPLPLAISDTNYLHNVVGDTEIRKGEGMELDQLFQDAYLREKTSYIQPFDMETLGQAFQLRETAPIDLPSAEKGTPTISGKSKIKSKDKVKKHKRHKEKDKDKYKDQKKHKHRHKDRSKDKEKEKEKEKEKEKKKDKSAHHDSGADRSKKHHEKKRKQEGLEDLASGHNPKKVQKRKNQ |
Length | 220 |
Position | Head |
Organism | Oryza sativa subsp. japonica (Rice) |
Kingdom | Viridiplantae |
Lineage | Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Oryzoideae> Oryzeae> Oryzinae> Oryza> Oryza sativa.
|
Aromaticity | 0.05 |
Grand average of hydropathy | -1.530 |
Instability index | 28.42 |
Isoelectric point | 9.77 |
Molecular weight | 25508.66 |
Publications | PubMed=16109971
PubMed=16100779
PubMed=23299411
PubMed=24280374
|
Function
Annotated function |
|
GO - Cellular Component | mediator complex GO:0016592 IBA:GO_Central
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
transcription factor binding GO:0008134 IBA:GO_Central
|
GO - Biological Process | positive regulation of transcription by RNA polymerase II GO:0045944 IBA:GO_Central
|
Interaction
Repeat regions
Repeats |
>MDP32108
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 119.92| 25| 25| 138| 162| 1
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138- 162 (45.69/15.40) KEKDKDKYKDQKKHKHRHKDRSKDK
164- 188 (40.15/12.81) KEKEKEKEKEKKKDKSAHHDSGADR
194- 218 (34.08/ 9.97) EKKRKQEGLEDLASGHNPKKVQKRK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.71| 15| 20| 74| 92| 2
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74- 92 (23.01/28.96) LFQDAYLREKTsyiqPFDM
95- 109 (26.69/19.58) LGQAFQLRETA....PIDL
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