<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32074

Description Uncharacterized protein
SequenceMPGLLKWKKRCSPVAMRPSRGLVPSPRKSPSKQRSSAHSAAAGEECYELQAVPSVIPALQAISAVRRAGALMARVMSPTADRIEGELWYIAGEYGPGKGNAAAPQWVTCDRHRLVVWSSWCGQGRIIDTVSFDRLRLILNFSHAHTHKVCQRQAPVTRYSAAKNFSLPSARGSRSPPQTFRRGTTTFARKKKLGAIATGRIRAYGGTSMPRYYYFGVEFTCLYRTEDGRNHRRRRVMMFATDVQHDLITWLQFLSDVEVKKVRETVCGGGSQGTKRARKSKQCMSPNVSYFLNESDCTAVDTSNETSLASSSPLDIDTTMDPAVAPSRASDREVEAPGQSIFSLFSSTVTDPTKSPSPQPIEKEQSEEVISNGSLLDISLHNNEPPQLAARPHTPKKKKASLKKVKKKTYEELRNERMMRENTELKRKNEELKKEIKVATDKITELQRNLQASERTNRYAEEECEHLRDSLLKVEKQKANLAKKLSESTGNEFQLQKQAVELHATLEEQAACIRALSEQITAADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCGLEQRVSETNATVEEQAACIRALSEQIAAADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCGLEQRVSETNATVEEQAACIRALSEQIAAADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCGLEQRVSETNATVEEQAACIRALSEQIAAADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCGLEQRVSETNATVEEQAACIRALSEQIAAADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCGLEQRVSETNATVEEQAACIRALSEQIAAADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCGLEQRVSETNATVEEQAACIRALSEQIAAADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCGLEQRVSETNATVEEQAACIRALSEQIAAADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSGGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCGLEQRVSETNATVEEQAACIRALSEQIAAADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCGLEQRVSETNATVEEQAACIRALSEQIAAADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRGEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCGLEQRVSETNATVEEQAACIRALSEQIAAADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEIPEQILRGHVDSFLCRVFTSLKCLRDVVAGFAVFMCSDVDVDGSPFLSFGQEGTLEKNIDLSLYRLELLVPTIDVLCRGLVGLCRFYEADRLSLMNGLTGLGVEPGGLVLNSVIPCADARRSLSGTLVDIVSAAGDISVVGDFGGNDNSVAEGGTKSLLQAVGVWQTSVEEFSAEEQCSYSKVVAGIVGGFRDEGIAARRALVNVRKALEGKVPCRDDVIDGNVVASQGSDLETSEGREVVRLIAEQRKSVLFALTSLLSSVSADGVERAMRLSKNVPFSDLVLLLRHECVNVSKAFMSLNAIVQEGSNIAIVTSGESGESSQPGSSVTGFTEVKGDNVVPSKTSAAIENVSSPDLAPSQSAGGEGGKLHTGKGPASASDSAMDSTVASAGICAVDGMPSHSTSLSRCPSVAAEDTDERADLLFSLRDFVEAEEASGKPLAIVQQVREHIHARTEELQQLRTAAVKSVETLSGDPLPAGAKPYDVAGALLAAVKTTSDSIGGVHALLSGVTLEEAPAQATRSLKPKAKPQPVGRCNSSIVLSLKRAVLLNPRLAQAGGRRSRESVQMGLSTASRSAGNRSSVSGNSSSGGGGASVGPQKLHELIKAIESKLKIVQHTRDTCSVCLYLLGDKEGGNVPAEELPTRLLLQAQDLFSGLTQIQNLDLGDEDDEPNADDKSSEGNSLVGKPSWITSRLLKVAKVFRSLQYINESMKQREAVAEKQRSFLLLDVNELRNTHAEEKRRLQDMLEGAKVQLRERDLNIKDMQQQNAILRADYDKACAESKHMTLELNDMRGTLDDLQHWLEGVEMAAGVVRRSSAAVWGQICSVEQKLTERLSAFIPTDHGRYRRTSKTNVEEKMEVSLTARETGGEVELVPVSGGKLVVQLVEDSASCLRQCEESLQLLERPLILVPALSEWIKQQYLSLKDNVSHAEEEVRSILRSCYRSAADLLYDKLRAVQRHREAELELDASHARWQGRLRDIEAAHKEHTAVLNRRLATMWDLTTQQDVLRAETARWQACAEAAAEETERLRVLLRAAESREVPQPTEVVKIIEVEPPRAPKPSTREVSIMTDLLIVEEPAVPDYDEATDVLKIRAELSDALEYAKHQADDAARCRSLMQEQLHLLDGGQGAVVDPSLSLGKLIETHKKRLLMHVDERRKLLEAWQTAQHNISRLKQEIDERERQRKKETRELETQIKELRVRVQRKLEMDMITERQIAEAERSIDREFEELCRRALSGLSVAAHLQQLRSSLMARIRMQMEAQRPRH
Length6062
PositionMiddle
OrganismTrypanosoma brucei brucei (strain 927/4 GUTat10.1)
KingdomEuglenozoa
LineageEukaryota> Discoba> Euglenozoa> Kinetoplastea> Metakinetoplastina> Trypanosomatida> Trypanosomatidae> Trypanosoma.
Aromaticity0.03
Grand average of hydropathy-0.299
Instability index54.15
Isoelectric point4.79
Molecular weight655919.95
Publications
PubMed=16020724
PubMed=16020726

Function

Annotated function 
GO - Cellular Component
ciliary transition zone	GO:0035869	IDA:GeneDB

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32074
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
            11|   10905.60|     415|     415|     523|     937|       1
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  495-  911 (1052.63/571.40)	LQKQAVELHATLEEQAACIRALSEQItaADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCG
  912- 1328 (1069.35/580.63)	LEQRVSETNATVEEQAACIRALSEQIaaADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCG
 1329- 1745 (1069.35/580.63)	LEQRVSETNATVEEQAACIRALSEQIaaADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCG
 1746- 2162 (1069.35/580.63)	LEQRVSETNATVEEQAACIRALSEQIaaADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCG
 2163- 2579 (1069.35/580.63)	LEQRVSETNATVEEQAACIRALSEQIaaADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCG
 2580- 2996 (1069.35/580.63)	LEQRVSETNATVEEQAACIRALSEQIaaADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCG
 2997- 3413 (1069.35/580.63)	LEQRVSETNATVEEQAACIRALSEQIaaADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCG
 3414- 3830 (1067.86/579.81)	LEQRVSETNATVEEQAACIRALSEQIaaADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSGGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCG
 3831- 4247 (1069.35/580.63)	LEQRVSETNATVEEQAACIRALSEQIaaADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRDEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCG
 4248- 4664 (1067.45/579.58)	LEQRVSETNATVEEQAACIRALSEQIaaADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEALECALRRQLHESLEEVRSAENALSAAEQALRCIPSGMDQYARDADGGSVSNDDSRELPTLALPARIEGVTRQACEFRGEMYKRHQELLDLVARGVCNEDALARVRELRCAKEAVETELQDTLREAEKRLCVVTACEGVLGETLCSDVVEQRQAELLCALRADVAEACGVSGSHVIDATIADDGSNVTFRVAHPYCVPAAAVLARVDSCAFDRVRRVNKWSCGDSEAVSFAEEDEAEREFVAVGTPAGEAFLARITELSGRFASVNGELRAAEDALAERPAVVVCG
 4665- 4812 (232.22/118.78)	LEQRVSETNATVEEQAACIRALSEQIaaADAYLRDAEGECGSLAGLLGLSPAEDGGDLGTGSAGLSLSNGALRIAERLRLACSAVHDLEQELKASGERERASIEECDRLRNELQKLESQRSDLEESLNAAEIPEQILRGHVDSFLCRV.............................................................................................................................................................................................................................................................................
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32074 with Med21 domain of Kingdom Euglenozoa
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