<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP32018

Description Uncharacterized protein
SequenceMEMETQIIDTVNDFLKVDSIDEAFGSVIVFKPNGEEDKAKNFSNDLVTAFGNVAQEHREHVLRLYLLRAASASSYHMRVMMAALVKLVDAHVITAWMLCDKVLMCEKLDYEHKTFWIESFRLIKKVIMQVDYKGVREIMKVCRDKAQWFPLNVNVTYMPQLLAVEEILRFLFDRNNCLLPAYFVANEIMRPFPYHWKLNKLMTDFVEEFRTTAQMVSIIGHANMLPIVEHFGYADHMMNSWRLDHNTLKFNFKGSLPYEPELLEEQRPLLRYVLEQPYSREMVSQMLNLQKHQKQRYNALEEQLVNLIIHAMEMTESNDTTAGSGFNSSDEQITSNEWVWLHLSSQLIYFVLFQFVSFMHIVLSLHEKLSKLELRKGRDQLMWILLQFISGSIQKNPITNFLPVFRLFDLLYPEQEPLKLPDINKSSMVRQMAPICVWIHLMKKARVENMNITRPLPIALKNHHDFLQHLVSPNTMMNMTLGNDFRIILVCNAYSTNQEYFGRPMGLLLEALNGTSKSPNGAQIPAVNFSVAVLDSLTVHSKMSLIHSFVTQMLKQAQTKGQVPAAALLETYARLLVYTEIESLGVKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRLHHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTGLRLITSIGSAEFQPQFSRYFNDKSPGAVASNESEELNRVLILTLARSMHVHGGGDEMQSWCKDFLANIMQHTPHSWSLQSLACFPPALNEYFTQNAQPPENKQQLKKSVEEEYRTWTSMTSENDIIAHFLRPTTNPLFLCLLFKIIWETESISPVAYKILEGISARALTTHLRKFCDYLVAEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLLLKASELRNRVQEFCKDNNPDHWKQSNWQDKHLSFHQKYPEKFALDESASHLALPVYFSNVCLRFLPVLDVVVHRFIELTIPNVHQILGFILDHLSILYKFHDRPITYLYNTLHYYERILRERPPLKKKLVSTITGAFSDIRPPNWSVSEPYKVFLQNQDLLWNPELSYYMNLIKRLSETISGKNVFYTTDWRFNEFPNAPAHALYVTCVELLGLPVAPALVANNLIDVIVSGYAVIPQKEIHSYINAVGIVMAALPEPYWTGIYDRLKEMLNTPNMLNWTYRFNAFELFNFKTVREAMLEKSYAVVLAVAHSVFHHMGVFKLAAMTRNIKEKLKPCVHTEQQLLYLCHVFGPFMKRIELETPNAVAGIAILLYEILEVVDKHSGSRPLQYVDQICDFLYHIKYIHVGNTIKNESEAIIKRLRPLLQMRLRFISYLNLEDIHAEKIAESNANSVTNQTQSPLQPQHQQQQQPMQQQQQPMHQQQQPMQQQQQPMLHQQQPMMQQQQPMQQQQQSMQQQQPMQQQQVNAAQTTSVPLGSGGNPQQQQLNQQQQMYMQHMQQQQQQQQQQQQHMQSMGMRHN
Length1473
PositionTail
OrganismDrosophila pseudoobscura pseudoobscura (Fruit fly)
KingdomMetazoa
Lineage
Aromaticity0.10
Grand average of hydropathy-0.223
Instability index44.37
Isoelectric point7.15
Molecular weight171023.88
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP32018
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     213.41|      19|      19|    1369|    1387|       1
---------------------------------------------------------------------------
 1352- 1366 (28.91/10.62)	.QSPL.QPQ.H..QQQQQPM
 1369- 1387 (46.87/21.57)	QQQPMHQQQ.QPMQQQQQPM
 1390- 1408 (44.61/20.19)	QQQPMMQQQ.QPMQQQQQSM
 1410- 1429 (28.73/10.51)	QQQPMQQQQvNAAQTTSVPL
 1432- 1448 (34.18/13.83)	GGNP..QQQ.QLNQQQQMYM
 1450- 1465 (30.11/11.35)	...HMQQQQ.QQQQQQQQHM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.03|      16|      20|    1154|    1172|       2
---------------------------------------------------------------------------
 1146- 1161 (28.94/11.69)	MAALPEP.YWTGIYDRL
 1164- 1180 (27.09/21.60)	MLNTPNMlNWTYRFNAF
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.83|      14|      20|     159|     178|       4
---------------------------------------------------------------------------
  159-  172 (23.87/24.70)	PQLLAVEEILR.FLF
  180-  194 (22.96/ 6.89)	PAYFVANEIMRpFPY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.59|      16|      20|    1080|    1095|       5
---------------------------------------------------------------------------
 1080- 1095 (32.88/20.80)	FYTTDWRFNEFPNAPA
 1098- 1113 (28.72/17.22)	LYVTCVELLGLPVAPA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.68|      14|      20|     202|     215|       6
---------------------------------------------------------------------------
  202-  215 (25.26/16.42)	MTDFVEEFRTTAQM
  224-  237 (27.42/18.47)	MLPIVEHFGYADHM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.47|      12|      25|      98|     111|       7
---------------------------------------------------------------------------
   98-  111 (18.01/18.46)	LCDKVLMceKLDYE
  122-  133 (20.45/12.17)	LIKKVIM..QVDYK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.43|      15|      25|     595|     609|       8
---------------------------------------------------------------------------
  595-  609 (28.99/21.36)	PTVFKNHAWAMLHTL
  621-  635 (26.44/18.70)	PTHYRVQLLSLLHSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     104.96|      25|      26|     961|     985|      10
---------------------------------------------------------------------------
  954-  976 (36.42/21.78)	VC..LRF...LP.........VLDVVVHRFIELTIPN
  977- 1001 (41.31/25.69)	VHQILGF...IL.........DHLSILYKFHDRPITY
 1002- 1038 (27.23/14.41)	LYNTLHYyerILrerpplkkkLVSTITGAFSDIRPPN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.75|      13|      19|     743|     755|      11
---------------------------------------------------------------------------
  743-  755 (25.09/15.35)	NEYFTQNAQPPEN
  765-  777 (24.66/14.96)	EEYRTWTSMTSEN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.50|      17|      26|    1259|    1278|      12
---------------------------------------------------------------------------
 1259- 1278 (23.33/23.59)	VAGIAILLYEILEVvdkHSG
 1285- 1301 (33.17/23.16)	VDQICDFLYHIKYI...HVG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      66.97|      18|      19|     698|     715|      13
---------------------------------------------------------------------------
  698-  715 (36.26/23.29)	LARSMHVHGGGDEMQSW.C
  719-  737 (30.70/18.49)	LANIMQHTPHSWSLQSLaC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.79|      18|      19|     896|     914|      15
---------------------------------------------------------------------------
  896-  914 (25.76/17.04)	KASELRNRVQEFcKDNNPD
  917-  934 (34.03/17.53)	KQSNWQDKHLSF.HQKYPE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.33|      20|      26|     434|     453|      17
---------------------------------------------------------------------------
  434-  453 (37.93/22.86)	PICVWIH..LMKKARVEN..MNIT
  457-  480 (27.40/14.40)	PIALKNHhdFLQHLVSPNtmMNMT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.98|      12|     486|      32|      43|      19
---------------------------------------------------------------------------
   32-   43 (23.28/16.19)	PNGEEDKAKNFS
  519-  530 (23.70/16.63)	PNGAQIPAVNFS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP32018 with Med23 domain of Kingdom Metazoa


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) IAESNANSVTNQTQSPLQPQHQQQQQPMQQQQQPMHQQQQPMQQQQQPMLHQQQPMMQQQQPMQQQQQSMQQQQPMQQQQVNAAQTTSVPLGSGGNPQQQQLNQQQQMYMQHMQQQQQQQQQQQQHMQSMGMRHN
1339
1473










Molecular Recognition Features






MoRF SequenceStartStop




NANANA