Description | Mediator of RNA polymerase II transcription subunit 13 |
Sequence | MDFPGGSITNIRAIDGFSTIYYRIYTDEQSIPSVPGDASSNAQAILRHLSRLKDLELRLRNLDCLVSSIPRRLGLWVFSATPDFENLTPLYLNNGKDEQNRIAVGSSTLKVSASGSVPAADLVRTLSSESPNTSGNQSGSQRPPNASTPTRRTDNYSSVALIYALFISAVTGALNSQLIRRNNAIPLGPRTLYSVVEKDSNNSPGVVISDASMVPCLATLQVQLTVIGKLTVSLQTISQPGLMRLRQPGDNLADVAALPPWTDLWLCPSGTIARLISTSPNTTNLSSPYPGAPPMKNDIVTTDPTQWKANVLDWLKNFGLTVEPEDDFSWVMVEVWEPFYSRLAGETWRPSDSSSTIPLKRILWPDIYCFRRKKSTISDDIKWMRQDVSDPLDFVQTWHGKQLPKPEVGSPGTPSNQQATSNPPGNHDASSLSEDVLEGLESLSRASQYPELQSASLVYPTPPDGAAGLGLNATATSDTFADDSDFGSGVLQRNGKAKFLEDTGAVPMEFGPSAGLTVGSGLYDTNEDNDLFGDMNERDFGTKGITDADFSFFDDPGFDHLGGDVPDSAQALSDMMELTEPNTQPTIVEAPPEAPVTEGPPVPEPDIPHVDHTDNPTGSHHGGSPVHDSPIRQQSPTEKNQTISPPLSPVEIKRILFPGTNGNVQPSTRKGRSQSYYNPIAFKEDISTWDQKYGASGKFGFTIQEPRALRYPSTSNGDIPTVGLPGRSRKVPMVDGVVLDVHDSSDAGQQNDLVSDSGSDSSDDGDNFLSEGDAPETVVSSLKRKRARSNSGNSLALSQAKSTNEGDKGTPAPKVDHSIFLGNFLSTSSDWSMAGYFSFQENQIFPVLARKDFQVQIAQLLVDQVTQSSLDHKLDGTCSISDLESETYSIQTFLDDNSFMSGIERLDLNGFVSLLDSDSVASPAPNGVSSRQPSQRKDALKGSLTKLPPPHLRVRRGKEYLEALPPTVLFWETFGLEPAHGPKDVSAYCIHPRIASNSADAFLDRLGSVYSSCNLGKHTRGDRCDAFDRGLGVWDISSDEVADYSSAMQSLKSLCANLGSALLKSPPSKDNLVIYIVNPFAHAAALVDICSAFWSLFQTYIAAADKQHTLQLDELVLQIVPVDFIMSTDSFVVPPQTQYLNLALEVYSRCPPKDQQTSLVNCAPPVLITEPLPKSINFRLASEKTSPLQEGKCLHVASSRSQDQRWISVAWSDNTGSLQRTMSYNIRFRNATASRTLQDVRGEIWGATKDIMERIQARWRIVLVNSDPVDQDEVDSWTKFVEQYNKANATPVELTMLNVSATPDLYLDPPPLPIPMSVFNPQTSSTPIATPNPSVLSPDQTGNASTPPSGGYSMANAPTPTDSALEAESESLLTDVTDETWAVTLSHRLNSSPHLMDYRPALASGYLLRRKGATDGDGVYTLTLNLIYTQRHSSSYETVLREILQMYRDLATLARARGTRTVQRSAMPWHIATAVRAQEALSYVM |
Length | 1485 |
Position | Kinase |
Organism | Aspergillus terreus (strain NIH 2624 / FGSC A1156) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Eurotiomycetes> Eurotiomycetidae> Eurotiales> Aspergillaceae> Aspergillus> Aspergillus subgen. Circumdati. |
Aromaticity | 0.07 |
Grand average of hydropathy | -0.385 |
Instability index | 45.35 |
Isoelectric point | 4.93 |
Molecular weight | 161787.68 |
Publications |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 RuleBase:RU364134 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP31975 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 185.04| 43| 53| 462| 504| 1 --------------------------------------------------------------------------- 406- 456 (57.47/35.26) PEVG.SPGTPS.NQQATSNppgnhdasSLSE..DVLEGLESLSRASQYPELQSAS 462- 504 (72.17/46.63) PPDG.AAGLGL.NATATSD........TFAD..DSDFGSGVLQRNGKAKFLEDTG 512- 557 (55.40/33.66) PSAGlTVGSGLyDTNEDND........LFGDmnERDFGTKGI.TDADFSFFDDPG --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 146.52| 48| 53| 717| 769| 2 --------------------------------------------------------------------------- 717- 769 (75.11/55.77) GDIPTVGLPGRSRKVPMVD.GVVLDVhdsSDAGQQNDlvSDSGS.....DSSDDGDNFL 772- 825 (71.41/40.34) GDAPETVVSSLKRKRARSNsGNSLAL...SQAKSTNE..GDKGTpapkvDHSIFLGNFL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 60.14| 16| 22| 599| 619| 3 --------------------------------------------------------------------------- 599- 614 (31.62/10.56) GPPVPEPDIPHVDHTD 623- 638 (28.52/16.60) GSPVHDSPIRQQSPTE --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 120.85| 38| 290| 356| 401| 4 --------------------------------------------------------------------------- 358- 401 (66.70/41.59) PL.....KRILWPDiycfrrKKSTISDDIKWMR.QDVSDPLDFVQ...TWHGK 646- 692 (54.15/20.37) PLspveiKRILFPG......TNGNVQPSTRKGRsQSYYNPIAFKEdisTWDQK --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 317.43| 104| 1208| 20| 206| 5 --------------------------------------------------------------------------- 70- 206 (161.78/161.41) PRRLGLWVFSATPDF....ENL.TPLYLNNGKDEQNRIAV.GSSTLkvsasgsvpaadlvrtlsseSPNTSGN....QSGSQRPPNASTPTRR.............TDNYSSVALiyalfisavTGALNS..QLIRRNNAIPLGprtlYSVVEKDSNNSPGV 1291- 1419 (155.66/59.41) PVELTMLNVSATPDLyldpPPLpIPMSVFNPQTSSTPIATpNPSVL....................SPDQTGNastpPSGGYSMANAPTPTDSaleaeseslltdvTDETWAVTL.........SHRLNSspHLMDYRPALASG....YLLRRKGATDGDGV --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 78.47| 23| 522| 306| 328| 7 --------------------------------------------------------------------------- 304- 326 (42.75/23.74) PTQW.KANVLD..WLKNFGLTVEPED 327- 352 (35.72/18.69) DFSWvMVEVWEpfYSRLAGETWRPSD --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 49.44| 14| 15| 1169| 1182| 9 --------------------------------------------------------------------------- 1169- 1182 (24.27/15.76) TEPLPKSINFRLAS 1185- 1198 (25.17/16.65) TSPLQEGKCLHVAS --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) EIKRILFPG 2) ILWPDIYCF 3) IYYRIYT | 651 362 20 | 659 370 26 |
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