<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31973

Description U-box domain-containing protein 70
SequenceMEAEDDERAEAEAEARREKEAGNAAYRKLYLETAVRHYTRGALLDPRDISFLTNRAAAYLLMSKYKECVRDCDEAVEKGRELRADNKLVARALARKASALLKLAACAADYDPAIRALQQSLAEHYSEETLAKLGEAEEARKEIEERERLDQEAADHHRDRGNDFFKQKRYQEAAMHYTEAMKKNPKDPRVFSNRAQCHIYLGALPEGLEDADKCIALDPTFLKGYLRKAKVQLLMGNYEIALATYVEGLKCDPNNLEVLDGLRRCAACIKRANGGDSRAEDLREILGDLHLNDDLCNKLQKSMDEAAVLKKEASDERLKRIESERLARTLEDLYLSQVQQRKETEESLSRVQQEFEQLKIQQDEVTVELQRVNEQNENLLGQLSDSREHFEWLLSEHDQLLRERDNAVREVEELRQKRGQMLSVLVTAMHCEFSSSEVESATENFSNSLKIGEGGFGCVYKGILRNMTVAIKVLRPDSLQGQSQFEQEVSILSRVRHPHLVTLLGACSESSTLVYEFLPNGSLEDFLMCSDKRQTLTWQARIRIIAEICSALIFLHKNKPHPVVHGDLKPANILLGVNLVSKLSDFGISRLLIQSSTNNTTLYRTMHPVGTPLYMDPEFLSTGELTPQSDVYSFGIVVLRLLTGKPPVGIKNIVEDAMEKGDLNSVIDTSVGEWPHLHIEQLAYLALRCTELSRRCRPDLSGEVWAIVEAIRDAALSSPSSSRSAQDQNSPPSYFICPISQDIMDDPHIAADGFTYEAEAIRSWLCNGHDTSPMTNLLLEHEELIPNRALRSAIQEWLQQHSMSL
Length805
PositionTail
OrganismOryza sativa subsp. japonica (Rice)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Oryzoideae> Oryzeae> Oryzinae> Oryza> Oryza sativa.
Aromaticity0.06
Grand average of hydropathy-0.469
Instability index49.71
Isoelectric point5.33
Molecular weight91024.99
Publications
PubMed=16100779
PubMed=18089549
PubMed=24280374
PubMed=15685292
PubMed=12869764
PubMed=19825577
PubMed=19825583
PubMed=27468891

Function

Annotated function Functions as an E3 ubiquitin ligase. Is recruited by MODD to promote ubiquitination of BZIP46, a positive regulator of abscisic acid (ABA) signaling and drought stress tolerance. 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-KW
protein serine kinase activity	GO:0106310	IEA:RHEA
protein threonine kinase activity	GO:0106311	IEA:RHEA
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31973
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     121.48|      22|      37|      55|      76|       1
---------------------------------------------------------------------------
   55-   76 (37.13/20.21)	RAAA.YLLMSKYKECVRDCDEAV
   95-  114 (32.15/16.59)	RKAS.ALL..KLAACAADYDPAI
  194-  215 (33.77/17.76)	RAQC.HIYLGALPEGLEDADKCI
  227-  245 (18.42/ 6.61)	RKAKvQLLMGNYEIALATY....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.76|      24|     199|     129|     152|       2
---------------------------------------------------------------------------
  129-  152 (39.38/21.67)	TLAKLGEAE.EARKEIEER.ERLDQE
  329-  354 (30.38/15.20)	TLEDLYLSQvQQRKETEESlSRVQQE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     139.28|      40|     137|      15|      54|       3
---------------------------------------------------------------------------
   15-   54 (66.69/44.89)	ARREKEAGNAAYRKLYLETAVRHYTRGALLDPRDISFLTN
  154-  193 (72.59/49.53)	ADHHRDRGNDFFKQKRYQEAAMHYTEAMKKNPKDPRVFSN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.61|      25|     367|     392|     418|       4
---------------------------------------------------------------------------
  392-  418 (39.17/31.43)	WLLSEHDqlLRERDNAVREVEELRQKR
  764-  788 (48.44/32.36)	WLCNGHD..TSPMTNLLLEHEELIPNR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31973 with Med32 domain of Kingdom Viridiplantae
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