Description | Mediator of RNA polymerase II transcription subunit 12 |
Sequence | MGAHPRPPQRSVSSSSLPVQRPPPQRSLSHQQQFMAAASPVRKDAPFIDLTADAGDATPNRYHTTPRRGGSRLRLELSHNASSSSLPTSESPQSLTPSRIPNSDPFQAMVGSPAGSASSTLMPMPTRRPVASQPRFAPRITATAPAPAKKDARPKPYTVEIPSVAPRYFSANRPETAVRNPVDPFSKGLNSGYADFFPWNGAHHEDEWSSEAITKGTWDKVNLNVPETSSAKLAIFPALKQKTGLNALSTIFMGVLTQRRHRGQINAPSTFKPPPRVTLTDTKREVWLKDLANPAISLRRLSRTIPHGIRGRTLLDQCLNKNVPAERAVWLAKCVGANEIRGLKRKGVNGAFVMGGELKWARDWTVFVEQFVDAVVAGFGENDWKNRVTYAIRLATNLYSEQLLDRDHYLDWVVSGIENSLQSRIPMWLLIAQIYWKDLLRSRKYGRRLVFALLSHLHVISNDPDQDLLVQLSSRLSALLGSLIRSNPESFINPGAWSTYKDTLHACLRSDDEQARKALHAINSRNSRLVVSSTASPPAGRSQLVKLLDAALKESSDNHLAAACWATSENKSLIMKTVVEWATSFHRPGLAKVYAATRLIRQWSQFRVNPTTPILETLDNIAANDKARKNLVYHLVTELVRTGHFSVSQYMQWTIARGGYHCAAEIDPVSGPCSSRLLVELPLHALSEKRRAERGNLLRRAGNYSVAEEDQDITNAIRVVKHVVGLPLLSNDPLSGRKPMSLKKLLQRMGGSSTALRSSIGAHLRDELTGQFIMKGHSLSLTMFTAVRDIMETAEDYAMLSDILGACAKTADSDVLASVADTVHSNLQIFCALDSANELFNSLIERLRMMNEEQRLVPRPLLAALSSLAQRMAGHEVIASQLRQDLVQNDRNNAIDACSPVSDIVATPSHQAENNVAEEVERTLSSGTRLDPPTMNKLFRMIIPALERGWEKEDDTRRVFATLLARIRVFDAHHFDKLMTDWTSHIRSISNRSSLSTLFPLLIITGCLTMPIIMSTASPPFANIQNLAPESSRGPATYLQELLQLVIMPLPQATGLVAEESYRFHTEQKCAKFEQSKGLLNLVRNALLEYSTSARDLTNSCSGGFLRRLKCFRHQIATKLLIPGDSGETQISFDHILQIANELTLPFCQLKLNLDLSLPQPSVIEGQDQSSSRFEIFARAMDRAIEAGNIMWTSLLPCLSDDITQHLKTQAQTGFLDLIPSSKAPEFVDTGSRQSLRMAENLLEVVEAIISGQAPPKMAQLSLGMVEKLTDLWEIVAAGPQERPNCHAAVLQHWLPAMLRFVNLHSLSSEPPSAPLPTASATRPPIPPVHDVRARIVLVLCGLLLELETLPPATVGSLVQQVFDIAILLVDALPEELRANCARATLLTPGGMPNQGTSSDPRLYYLFSSPPPSPSDNLMLSHREKAATPQSAAARGMGAQYGIGPVVQERLSPFILRRWEVLSEPTPNVGENDTSLSLGLFEAIKLQ |
Length | 1487 |
Position | Kinase |
Organism | Fusarium oxysporum f. sp. cubense (strain race 1) (Panama disease fungus) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Sordariomycetes> Hypocreomycetidae> Hypocreales> Nectriaceae> Fusarium> Fusarium oxysporum species complex. |
Aromaticity | 0.06 |
Grand average of hydropathy | -0.219 |
Instability index | 53.12 |
Isoelectric point | 9.05 |
Molecular weight | 164018.90 |
Publications | PubMed=24743270 |
Annotated function |
Component of the SRB8-11 complex. The SRB8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The SRB8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
Component of the srb8-11 complex. The srb8-11 complex is a
regulatory module of the Mediator complex which is itself involved in
regulation of basal and activated RNA polymerase II-dependent
transcription. The srb8-11 complex may be involved in the
transcriptional repression of a subset of genes regulated by Mediator.
It may inhibit the association of the Mediator complex with RNA
polymerase II to form the holoenzyme complex.
ECO:0000256 ARBA:ARBA00002895 ECO:0000256 ARBA:ARBA00003744 |
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro |
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro |
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro |
Binary Interactions |
Repeats | >MDP31903 --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 3| 258.72| 92| 101| 762| 862| 1 --------------------------------------------------------------------------- 741- 799 (51.06/38.56) ............................................SLKKLL.QRMGGSS..TALRSSIGAHLrDELTGQfiMKGHSLSLTMFTavRDIMETAEDYAM 800- 895 (142.82/92.63) LSDILGACAKTADSDVLASVADTVHSNLQifcaLD..SANELFNSLIERL.RMMNEEQ..RLVPRPLLAAL.SSLAQR..MAGHEVIASQLR..QDLVQNDRNNAI 901- 964 (64.83/32.52) VSDIVATPSHQAENNVAEEVERTLSSGTR....LDppTMNKLFRMIIPALeRGWEKEDdtRRVFATLL...................................... --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 218.05| 81| 101| 1121| 1216| 2 --------------------------------------------------------------------------- 1024- 1132 (101.66/68.23) IQNLAPESSRgPATYLQELLQLvimPLPQATglVAEesyrfHTEQKCAKFE.......QS..KGllNLVRNALLEYSTS..ARDLTNSCSGGFLrrlkcfrhqiatklLIPG.......DSGETQiS 1136- 1235 (116.40/90.51) ILQIANELTL.PFCQLKLNLDL...SLPQPS..VIE.....GQDQSSSRFEifaramdRAieAG..NIMWTSLLPCLSDdiTQHLKTQAQTGFL.............dLIPSskapefvDTGSRQ.S --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 41.47| 11| 67| 13| 23| 3 --------------------------------------------------------------------------- 13- 23 (21.97/11.05) SSSSLPVQRPP 82- 92 (19.51/ 8.89) SSSSLPTSESP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 124.46| 39| 93| 24| 62| 4 --------------------------------------------------------------------------- 24- 62 (72.37/40.85) PQR................SLSHQQQFMAAASPVRKD...APFIDLTADA...GDATPNRY 97- 157 (52.08/27.21) PSRipnsdpfqamvgspagSASSTLMPMPTRRPVASQprfAPRITATAPApakKDARPKPY --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 48.65| 12| 101| 1304| 1315| 5 --------------------------------------------------------------------------- 1304- 1315 (23.23/11.99) LHSLSSEPPSAP 1403- 1414 (25.43/13.96) LYYLFSSPPPSP --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 101.61| 33| 93| 1255| 1291| 6 --------------------------------------------------------------------------- 1255- 1291 (56.55/49.18) PPKmaqlSLG.MVEKLTDL.WEIVAAGPQE.RPNCHAAVL 1351- 1386 (45.06/29.06) PPA....TVGsLVQQVFDIaILLVDALPEElRANCARATL --------------------------------------------------------------------------- --------------------------------------------------------------------------- No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level 2| 78.84| 24| 109| 497| 520| 12 --------------------------------------------------------------------------- 497- 520 (42.42/29.53) WSTYKDTLHACLRSDDEQARKALH 541- 564 (36.42/24.23) RSQLVKLLDAALKESSDNHLAAAC --------------------------------------------------------------------------- |
MoRF Sequence | Start | Stop |
1) ARPKPYTVEI 2) FAPRITA 3) FIDLTA 4) RLYYLF | 152 136 47 1402 | 161 142 52 1407 |
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Designed by Dr. Shailesh Lab & Dr. Jitendra K. Thakur Lab