<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31884

Description "Serine/threonine protein kinase, CMGC family, CDC2/CDK subfamily"
SequenceMNATPYAPQRHINDHYDIVGFISSGTYGRVYKAISKRGTPAFAIKKFKPDKEGELQYTGISQSAIREMALCTELSHPALIHLVEIILESKCIFMVFEYAEHDLLQIIHHHSLLPRTPIPASALRSCMYQIFSGLLYLHQNWLIHRDLKPANIMVTSGGAIKIGDLGLARLFYKPLHALFSGDKVVVTIWYRAPELLLGSRHYTPAIDLWAVGCIFAELLSLRPIFKGEEAKQDSKKAVPFQRNQMGKIGEILGLPKKNEWPLLTAMPEFPNLATVSMHNPGVNRPMGLEKWYRNTIQNNNYGGPTSPPPDESALDLLRKLLEYDPLKRLTAEQALKHPYFTGTGKLPSWNCFEGLETKYPPRKVSTEAHEIGTGSLPGTKRSGLPDDTLLRPQKKIRDG
Length399
PositionKinase
OrganismPseudocercospora fijiensis (strain CIRAD86) (Black leaf streak disease fungus) (Mycosphaerella fijiensis)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Dothideomycetes> Dothideomycetidae> Mycosphaerellales> Mycosphaerellaceae> Pseudocercospora.
Aromaticity0.09
Grand average of hydropathy-0.284
Instability index45.35
Isoelectric point9.19
Molecular weight44856.47
Publications
PubMed=23236275

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein serine/threonine kinase activity	GO:0004674	IEA:UniProtKB-KW

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31884
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     290.58|      90|     100|     189|     288|       2
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  189-  288 (133.17/94.55)	WYRApelLLGSRHY....TPAIDLWAVGcIFAELLSLRPIfKGEEAKQDSKKAVPFQRNQMGKIGEILGLPKKneWPLLTAMPEFPNLATVSMhnPGVNRPmGL
  291-  384 (157.42/80.61)	WYRN...TIQNNNYggptSPPPDESALD.LLRKLLEYDPL.KRLTAEQALKHPYFTGTGKLPSWNCFEGLETK..YPPRKVSTEAHEIGTGSL..PGTKRS.GL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.89|      17|      28|     103|     130|       3
---------------------------------------------------------------------------
  103-  120 (27.34/31.39)	LLqIIHHHSLLPRTPIPA
  134-  150 (32.55/11.10)	LL.YLHQNWLIHRDLKPA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31884 with CDK8 domain of Kingdom Fungi
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