<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31859

Description Cyclin-dependent protein kinase Ssn3
SequenceMDRYKVIGFISSGTYGRVYKAHGRQGQPGEFAIKKFKPDKEGEQVQYTGISQSAIREMALCSELSHQNIIKLVEIILEDKCIYMVFEYAEHDLLQIIHHHTQPIRHPIPPSTVKSIMFQLLNGSHYLHVNWVLHRDLKPANIMVTIGGEVKIGDLGLARLFNKPLHSLFSGDKVVVTIWYRAPELLLGSRHYTPAVDMWAIGCIFAELLSLRPIFKGEEAKIDSKKTVPFQRNQMQKIVEIMGMPTKEKWPLLIKMPEYSNLATLSSGHSSKSGSLLEKWYYSTINSTQSSAASNVSLGVEGYKLLSGLLEYDPERRLTAQQALQHPFFSTGDKFSNNCFEGIKAEYPHRRVSQEDNDIRSCSLPGTKKVGPVDDSRPAKRLKE
Length384
PositionKinase
OrganismBlumeria graminis f. sp. hordei (strain DH14) (Barley powdery mildew) (Oidium monilioides f. sp. hordei)
KingdomFungi
LineageEukaryota> Fungi> Dikarya> Ascomycota> Pezizomycotina> Leotiomycetes> Erysiphales> Erysiphaceae> Blumeria.
Aromaticity0.09
Grand average of hydropathy-0.337
Instability index38.44
Isoelectric point9.04
Molecular weight43457.58
Publications
PubMed=21148392

Function

Annotated function 
GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP31859
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      60.36|      17|      29|     130|     146|       1
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  130-  146 (31.25/22.68)	NWVLHRDLKPANIMVTI
  162-  178 (29.11/20.66)	NKPLHSLFSGDKVVVTI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.03|      28|      32|     248|     278|       2
---------------------------------------------------------------------------
  248-  276 (45.66/29.83)	EKWPL.LIKMPEYSNLATLS...SGHSSKSGsL
  278-  309 (39.37/26.41)	EKWYYsTINSTQSSAASNVSlgvEGYKLLSG.L
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP31859 with CDK8 domain of Kingdom Fungi
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