<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31606
Description |
Mediator of RNA polymerase II transcription subunit 24 |
Sequence | MKVVNLKQAILQAWKERWSDYQWAINMKKFFPKGATWDILNLAEALLEQAMIGPSPNPLILSYLKYAISSQMVSCSSVLTAISKFDDFSRDLCVQALLDIMDMFCDRLSCHGKAEECIGLCRALLSALHWLLRCTAASAERLQEGLEAGTPAPGEKQLALCLQCLEKTLSSTKNRALLHIAKLEEASSWTAIEHSLLKLGEILANLSNPQLRSQAERCGTLIRSIPSMLSVHSEQLHKTGFPTIHALILLEGTMNLTGEMQPLVEQLMMVKRMQHIPTPLFVLEIWKACFVGLIESPEGTQELKWTAFTYLKIPQVLVKLKKYFHGEKDFTEDVNCAFEFLLKLTPLLDKADQRCNCDCTNFLLQECNKQGLLSEVNFASLVGKRTADRDPQLKSSENANIQPNPGLILRAEPTVTNILKTMDADHSKSPEGLLGVLGHMLSGKSLDLLLAAAAATGKLKSFARKFINLNEFTTHGSGESTKTASVRALLFDISFLMLCHVAQTYGSEVILSESSSGEEVPFFETWMQTCMPEEGKILNPDHPCFRPDSTKVESLVALLNNSSEMKLVQMKWHEACLSISAAILEILNAWENGVLAFESIQKITDNIKGKVCSLAVCAVAWLVAHVRMLGLDEREKSLQMIRQLAGPLYSENTLQFYNERVVIMNSILEHMCADVLQQTATQIKFPSTGVDTMPYWNLLPPKRPIKEVLTDIFAKVLEKGWVDSRSIHILDTLLHMGGVYWFCNNLIKELLKETRKEHTLRAVQLLYSIFCLDMQQVTLVLLGHILPGLLTDSSKWHSLMDPPGTALAKLAVWCALSSYSSHKGQASSRQKKRHREDIEDYVSLFPVEDMQPSKLMRLLSSSDDDANILSSPTDRSMNSSLSASQLHTVNMRDPLNRVLANLFLLISSILGSRTAGPHTQFVQWFMEECVGCLEQDSRGSILQFMPFTTVSELVKVSAMSSPKVVLAITDLSLPLGRQVAAKAIAAL |
Length | 987 |
Position | Tail |
Organism | Mus musculus (Mouse) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi> Mammalia>
Eutheria> Euarchontoglires> Glires> Rodentia> Myomorpha> Muroidea> Muridae>
Murinae> Mus> Mus.
|
Aromaticity | 0.07 |
Grand average of hydropathy | 0.026 |
Instability index | 47.49 |
Isoelectric point | 6.38 |
Molecular weight | 109983.82 |
Publications | PubMed=10406464
PubMed=11471062
PubMed=16141072
PubMed=19468303
PubMed=15489334
PubMed=12093747
PubMed=11934987
PubMed=17242355
PubMed=21183079
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors (By similarity). Required for
basal and activator-dependent transcription.
ECO:0000250
ECO:0000269 PubMed:10406464
ECO:0000269 PubMed:12093747
|
GO - Cellular Component | mediator complex GO:0016592 IDA:MGI
nucleoplasm GO:0005654 TAS:Reactome
nucleus GO:0005634 ISO:MGI
ubiquitin ligase complex GO:0000151 ISO:MGI
|
GO - Biological Function | histone acetyltransferase activity GO:0004402 ISO:MGI
protein-containing complex binding GO:0044877 ISO:MGI
thyroid hormone receptor binding GO:0046966 ISO:MGI
transcription coactivator activity GO:0003713 ISO:MGI
transcription coregulator activity GO:0003712 ISO:MGI
|
GO - Biological Process | positive regulation of transcription initiation from RNA polymerase II promoter GO:0060261 ISO:MGI
positive regulation of transcription, DNA-templated GO:0045893 ISO:MGI
protein ubiquitination GO:0016567 ISO:MGI
stem cell population maintenance GO:0019827 IMMGI
transcription by RNA polymerase II GO:0006366 IMMGI
|
Interaction
Repeat regions
Repeats |
>MDP31606
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 248.24| 84| 193| 161| 259| 1
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161- 259 (109.47/130.79) ClQCLEKTLSSTKNRALL...HIAKLeeASSWTAIEHSLLKLGEIlANL.SNPQLRSQAErcGTLIRSIPSMLSVHSEQlhktgfPtiHALILLEGTMnLTGE
357- 444 (138.77/103.84) C.DCTNFLLQECNKQGLLsevNFASL..VGKRTADRDPQLKSSEN.ANIqPNPGLILRAE..PTVTNILKTMDADHSKS......P..EGLLGVLGHM.LSGK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 41.41| 14| 16| 583| 596| 2
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583- 596 (23.68/15.28) ILEILNAWENGV..LA
600- 615 (17.73/ 9.68) IQKITDNIKGKVcsLA
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 157.08| 47| 192| 702| 755| 3
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702- 755 (73.27/62.21) KRPIKEVLTDIFakVLEKGWVDSRSIHIldtllHMGGVYWFCNNLIKELLKETR
892- 938 (83.81/53.74) RDPLNRVLANLF..LLISSILGSRTAGP.....HTQFVQWFMEECVGCLEQDSR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 41.02| 13| 28| 307| 319| 4
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307- 319 (22.82/17.44) AFTY.LKIPQVLVK
337- 350 (18.20/12.13) AFEFlLKLTPLLDK
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 178.11| 53| 116| 643| 699| 6
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643- 699 (84.36/64.49) QLagpLYSENTLQFYNERVVIMNSILEHMCADVlQQTATQIKFPSTGVDTMPYWNLL
764- 816 (93.75/58.79) QL...LYSIFCLDMQQVTLVLLGHILPGLLTDS.SKWHSLMDPPGTALAKLAVWCAL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 108.52| 33| 68| 479| 514| 7
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479- 514 (50.87/45.28) ESTKTASVRALLFDISFLMLChvaQTYGSEVILSES
548- 580 (57.65/41.88) DSTKVESLVALLNNSSEMKLV...QMKWHEACLSIS
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