<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31600
Description |
Mediator of RNA polymerase II transcription subunit 24 |
Sequence | MIMDNQKSTSKTTLLKLMLLRAWKERWTDCQWGINVKAVLTRGVSGDVYNLADCILQQAVVGSGANTLFLSYLKHSLCAHLISHAAVLKRISKYDHFEMHHCLIALLEFLESIIGGVTCRGKQEEGLLTKAMLSLVYWLMQIYEHAIETFSENRSLTTEQQEVVEKTANVLEKIVQSQFLLGVVFVGKFEDPELFGMLAKKCLEIENLTVKSGFVPPVVSQKNVTVNDYIRKVASIETETLEIKEFDGKGVEPITYCMQPLIAIDILFNPNCDTQMYVLEFLSIQALKGFPLSRLYCEIIRACLTCLNNVSGTSRESYICAFTFIKVPQIMRQIHLQTRVLTPNDFEDAKLDYSPDVVEAFELLLQDSAILDFMDAKCACNTVEYLLNEMLKHHLINEKYSKLIAAKRDGITSSLQKLDLNTNQHSIVKFVLRAEPPLVGILKTLSSDYNKVQEALLGMLCQVLSGNSFELILSVATVEGKLKTFVAGLIKCNENSKQVPGEMGKPAMTRAALFDVSFLMLVFIVQNYGSEGVLTDGTDSFFEKWVRECMVEKHKSKSPMNMVKLCDQNKVDELIVSLNSPDGLKATSLKWQEICANIPGLLYQVLLAWENETLSTGEIKKFLDSLKSRFCCFSICATSWLCAYMQIIRQDELLKPMNMIQQFVTNISSEEMMQQEYLKERLGLTVQIIRKMQIDFQRLPVASPKMRNQLQSQSLVSQAPLEEQFEEVWKGVLEKGWLPIEATLALENLLQSCGPFWLVDKLVQQIFHCKYIREMNKTMDIVFAIMHLDIERCTIALLSQLVPMMLLNKLQISEIVDPFSRVLAKLCVYCIVATMEAPAVPTKKRSRAAITAEGDELDTLCSTPKMRKIGSESCDSSSSDFMLEQVLAARDNPAPLKEPLQGCLQTLFRTFSQYIVSDELSPKIFFMFQLLSLLVEVGKDRIKPVLKLIPNGLIQNMMKINATDDMTVGFILRLYDLNTASGRQFAMSDLCLFRNIQMRKDSIKL |
Length | 1005 |
Position | Tail |
Organism | Aedes aegypti (Yellowfever mosquito) (Culex aegypti) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Ecdysozoa> Arthropoda> Hexapoda> Insecta> Pterygota>
Neoptera> Endopterygota> Diptera> Nematocera> Culicoidea> Culicidae>
Culicinae> Aedini> Aedes> Stegomyia.
|
Aromaticity | 0.08 |
Grand average of hydropathy | 0.079 |
Instability index | 41.37 |
Isoelectric point | 6.08 |
Molecular weight | 113799.23 |
Publications | PubMed=17510324
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors (By similarity).
ECO:0000250
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | |
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP31600
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 192.40| 60| 155| 704| 767| 1
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704- 767 (92.88/64.19) PKMRnQLQSQSLVSQAPlEEQFEEVWKGvlEKGWLPIEATL..ALENLLQSCGPFWLVDKLVQQIF
864- 925 (99.52/55.75) PKMR.KIGSESCDSSSS.DFMLEQVLAA..RDNPAPLKEPLqgCLQTLFRTFSQYIVSDELSPKIF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 98.91| 27| 45| 30| 56| 2
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30- 56 (48.77/30.20) CQWGINVKAVLTRGVSGDVYNLADCIL
78- 104 (50.14/31.23) CAHLISHAAVLKRISKYDHFEMHHCLI
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 130.67| 39| 39| 611| 649| 3
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611- 649 (69.68/46.24) NETL.STGEIKKFLDSLKSRFCCFSICATSWLCAYMQIIR
651- 690 (61.00/39.54) DELLkPMNMIQQFVTNISSEEMMQQEYLKERLGLTVQIIR
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 260.14| 64| 154| 252| 316| 4
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252- 316 (108.12/67.78) EPITYCMQPLIAIDILFNPNCDTQmYVL..EFLSIQALKGFPLSRLYCEIIRACLTCLNNV.SGTSRE
359- 406 (64.67/35.13) EAFELLLQDSAILDFM.DAKCACN..TV..EYLLNEMLKHHLINEKYSKLIAA...............
409- 470 (87.34/49.90) DGITSSLQKL...DLNTNQHSIVK.FVLraEPPLVGILK..TLSSDYNKVQEALLGMLCQVlSGNSFE
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 146.23| 47| 624| 167| 216| 9
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167- 216 (70.48/58.73) TANVLEKIVqSQFLLGVVFVGKFEDPelFG.MLAKKCLEIENLTVKSGFVP
794- 841 (75.75/51.74) TIALLSQLV.PMMLLNKLQISEIVDP..FSrVLAKLCVYCIVATMEAPAVP
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