<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31465
Description |
Mediator of RNA polymerase II transcription subunit 17 |
Sequence | MDGFSEYDPEKGIPLAIDPNLISIPVSTSLTTNGNGDEGVNNEDATVFAADDADNAKSQKSLIQNPYEYFGQMPLEQFIPLMLQQRGTGTKFADIHEETLLEEISRENSSKSNNAIQEEDNDDSAIQNVDEKTTTVVNEGVSDSHEMKDEDGDVNMDVPSVESSPKLAEEREPTADANDAQRAISGNQEESITLEEFKMIKKNVLEHVNMALNESSLSLEFVSLLLSSTRTSAGISSMSPYLKKIAPPASLNADKVPLDILDEHEKLTYDIIHKGWNLRSLEDCKRLLKQHYQILSKSVESEYHYWKQISDNITNKDVLFKMKDKNTGRRTLGIKYGFDDSGSCYSADKGIALLRATSEGSQLELVPIIDSGINVGISRGSSEQFVRVRIFTKIEQEDDYLLSGQSSLNELLLSSRSDIKSQIAKLRFFIFEKELMHQLKKEAGQLLPYGVSVENENKVLLELSNEKIEFELINLDEEVTSNYQQEAAKVNDKRANLILVMLNMLLVVMYKKQLWKRLNPNPHSSKSSKGYGKDLVLLRAILGKIRHKKYTQLIEKIVNNAILEKKEDSIMTTNTDITSNDNEPSKNKELATLQREIALFDKILSMPRTDFTINIPEKGKLELSLRSTNHCNAIIHMKYIDVGQVVKFDTRFSEFTEFEEFLNFVYNEFLI |
Length | 671 |
Position | Head |
Organism | Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (Yeast) (Candida sphaerica) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Saccharomycetaceae> Kluyveromyces.
|
Aromaticity | 0.07 |
Grand average of hydropathy | -0.499 |
Instability index | 44.99 |
Isoelectric point | 4.96 |
Molecular weight | 75887.73 |
Publications | PubMed=15229592
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors (By similarity).
ECO:0000250
|
GO - Cellular Component | core mediator complex GO:0070847 IEA:EnsemblFungi
mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | activating transcription factor binding GO:0033613 IEA:EnsemblFungi
RNA polymerase II complex recruiting activity GO:0001139 IEA:EnsemblFungi
RNA polymerase II core promoter sequence-specific DNA binding GO:0000979 IEA:EnsemblFungi
transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | positive regulation of transcription by RNA polymerase II GO:0045944 IEA:EnsemblFungi
|
Interaction
Repeat regions
Repeats |
>MDP31465
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 49.59| 16| 270| 184| 208| 4
---------------------------------------------------------------------------
184- 203 (23.93/26.22) ISGNqeesITLEE..FKMIKKN
309- 326 (25.66/ 7.84) ISDN....ITNKDvlFKMKDKN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 90.07| 30| 95| 466| 497| 8
---------------------------------------------------------------------------
466- 497 (39.95/33.64) EKIEFELINLDEEVTSNyQQEAAKvNDKRANL
564- 593 (50.11/31.53) EKKEDSIMTTNTDITSN.DNEPSK.NKELATL
---------------------------------------------------------------------------
|