<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31412
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MDEIHGEVSPPAINRSNGALVSDNISQVVEGVDNVERPAKVAKGYSAANRPPPELPHITNNVIPLSNVLKFYTQEAFKQITTLVENLASTKDSEDDSVRKKKFLELIIALRQDFIKIYTLVKWAANSKDVSRFIDLLNWLRMQEFYFDQLTFQLNALNGYSGAKLPNSDLITSLEVLFKGRPQLPSYNYIKIPKISPEKTLEVMQDLNLILMTRIALIDIPKRFINNYVIKDGRIYFSVPNEFQVSITVANDMIIESHDEYTKSPFYFIDFKFLFGINPDTSLITHRDNKIVTKLPRSSHENLEKIVNATLLNQGLHGLYDLLHKFSISFKLYLIAKQLKELQINTRWRNNLQVNYQNGKSLIILNYWSGQYLSKGWKSFIELGIDRNYNLNFRWFKNGKYNVNTELSALFNKHLKNTNEGEEEKDDSTDDIEEPEDLNVDLILNIVVNKHSELLMSKVFNSLDAKLNTTDNPDQISYITPHQLLIKSSPTKSTIFCINPLTGLFYFIDPCPVQNLIAKKINSPPTVVKNKNFVAESDMVNTIVDGLTQLRLEIFNKEIHNRLLTTEWINNDIIGLNDYEISRLSNFFANSLDYNLNVNKIQFYRRKNWPSSWFLINLVSGVTSVTFWWVARIKSVSGEWKIQWIQKLHLNEKTPSVEITDDPTNLNFEFFNNLSTACSNMIIDHMLLEELFKRNIKFLKVDNTALILQKFNIDKIPDDEDTQDTDDKNKPLIYESIIMIYNDNNLLPVYNSATSLFLKIKLINLNNLTQMKLKLFGKLRNLSIRNSPENFLQLNLKIDEIKNFFEIDDLINLSSRTNGSDSASSATTNHLLDKIFNNLNKLNKLIKILDQLNKNKIQIINNSVNDIIIKIDDNLDNLIIKLPEKATDSIKLISEEEVKDGGNPEVKLILDYLNKYLSNYYSDDFFANDEDKFYDGNKKTSIVGIIKYLKEINPILKSVQTIKAKLRKPESAFKLSNGLSKLNFDIKFTTLNLIQYVFHMNYQTPSSSKKIFKDKIVISLSFKNNKFDKVSKNLIKISLKDNLNSKNLKYKKLFELIFKSINDGSMDAHAHQLIKLNYDFLVNSSLVGELMVRIANCFVLYLQAESNGRYNQ |
Length | 1112 |
Position | Tail |
Organism | Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) (Yeast) (Pichia stipitis) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Debaryomycetaceae> Scheffersomyces.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.303 |
Instability index | 28.65 |
Isoelectric point | 8.56 |
Molecular weight | 128365.80 |
Publications | PubMed=17334359
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors (By similarity).
ECO:0000250
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP31412
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 90.17| 31| 39| 1001| 1037| 1
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1001- 1037 (46.33/26.73) NYQTPS.SSKKIFKdkivisLSFK...NNKFDKVSKNLIKI
1042- 1076 (43.84/16.98) NLNSKNlKYKKLFE......LIFKsinDGSMDAHAHQLIKL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 329.68| 82| 278| 381| 462| 2
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381- 462 (138.03/77.97) IELGIDRNYNLNFRWFKN......GKYN.VNT..ELSALFNKHLK.....NT....NEGEEEK..DDSTDDIEEPEDLNVDLILNIVVNKHSELLMSKVFNS
657- 752 (104.52/57.07) VEITDDPT.NLNFEFFNNlstacsNMII.DHM..LLEELFKRNIKflkvdNTalilQKFNIDKipDD..EDTQDTDDKNKPLIYESIIMIYNDNNLLPVYNS
780- 850 (87.13/46.23) RNLSI.RNSPENFLQL.N......LKIDeIKNffEIDDLIN..LS.....SR....TNGSDSA..SSATTN.....HL.LDKIFN.NLNKLNKLI..KILD.
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 246.68| 79| 219| 262| 351| 3
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145- 242 (119.30/68.06) FYFDQLTFQLNALNGYSGAKLPNSDLITslevlfkgrpqlpsynyiKIPKISPEKtLEVMQDLNLILMTRIALIDIPKRF...INNYVI....KDGRIYFSVPNE
266- 351 (127.38/86.53) FYFIDFKFLFGINPDTSLITHRDNKIVT..................KLPRSSHEN.LEKIVNATLLNQGLHGLYDLLHKFsisFKLYLIakqlKELQINTRWRNN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 56.55| 16| 34| 77| 92| 5
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77- 92 (27.18/16.68) FKQITTLVENLASTKD
114- 129 (29.37/18.60) FIKIYTLVKWAANSKD
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 95.03| 31| 33| 882| 913| 6
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882- 913 (45.81/34.28) LPEKATDSIKLISEEEVKDgGNPEVKL..ILDYL
917- 949 (49.22/31.70) LSNYYSDDFFANDEDKFYD.GNKKTSIvgIIKYL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.96| 11| 220| 545| 555| 10
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545- 555 (19.29/10.75) DGLTQLRLEIF
766- 776 (19.67/11.09) NNLTQMKLKLF
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 38.15| 12| 29| 102| 113| 11
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102- 113 (19.92/11.49) KFLELIIALR.QD
132- 144 (18.24/ 9.88) RFIDLLNWLRmQE
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