<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP31401
Description |
Mediator of RNA polymerase II transcription subunit 14 |
Sequence | MSLLSIDDIFIPTSDLLNHSHNNKRLNYNQAKQTLLLNMNGSYPSSNNPISNGEPCDAKSNHLGGEMHNGVGSKLENGILKKAPDIPHITNNIIPLSNVLKFYTQEAYKQLTTAIENLSSTKDTENDSSRKKFFLNLIISLRQDFIKIYTLVKWASSSKDISKLIDLLNWFRSQDFYFEQLGYGLNELNRYSGAKLPNSDIITSLEVFIKKRPQLPSYNLISTPPISSEKTLEVLKDLNLTLMTRMALINNLPKRFINNYEIRDGRVYFTIQNEFQVSVTVGNDLIIEQEDDYYKSPFYFIDFKFLFGINPETALITHKDNKIITKLPKSSFQNLEKIVNTVLLNSGLGGLYDLLHKYSISFKLYLIARQLKDISINSKWRNNIQFKYQNGKSLILINYWSSHYLSRNWKSFIELGIDKNYNLNFRWFKNGTYELNHGISGIFDRNNIKKQSDASDEQQNNIEPNEESLEDLREDNNEDESEPQDLSVDLILNIIVNKHSEMLMDKIYETIVKRLSDQEEYCSFISCHQLLLKLTPNKSVVFAINPLTGFFYFIDPSPIQNQVTKKINTQSSNHKNKPFFSENDMVENIVNQLIQLKLEMFNKEINNKLITSGWINNEIIKLNDYETIKLSNFLNGDNFNNSNYNKIQFYRCKNWPLSWFLSNLVSGDNFRTFWWVARIKSIKGEWKIQWVQQLKFDQEMETSDELTLDYKFFNNLSSLCSNMIIDHMILEELQTKKIQYIQKQSKEKAAELLNKFQIDEVKEENIKPEETNNPFVYESIIMLYNDNRLLPVSNSSTSLFLKIKLITLNNSTQMKLKLFGNLRNIPNTLAETFNQLNLHISKSQNYFEINDIVNLSNKINDSSIKETRLLDSILLKLNVLNELIKVLYQLDQNNIEIVNSSIDSIQIKIDEESNNLTIKLPEMDEKFSLLSSNTESNEMKLIISYLNKYLSMTSKVQENEIIGIIKYFKEITPIVKTIKSVRATLDEKNKMKLSNGLSKLNFDVEFQNLNLIQFVYFLNHTNVNSNKKILKDKIVIKLNFMRNRFNKQDRLLLKLSMKDNLNSRNLKYKKLFELIYKGISEVDTTNGSKITKLNYDFIVDSSLINELMIKITDAFILFLSDNA |
Length | 1123 |
Position | Tail |
Organism | Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii) |
Kingdom | Fungi |
Lineage | Eukaryota> Fungi> Dikarya> Ascomycota> Saccharomycotina> Saccharomycetes>
Saccharomycetales> Debaryomycetaceae> Debaryomyces.
|
Aromaticity | 0.10 |
Grand average of hydropathy | -0.408 |
Instability index | 34.27 |
Isoelectric point | 8.07 |
Molecular weight | 130807.10 |
Publications | PubMed=15229592
|
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors (By similarity).
ECO:0000250
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | transcription coregulator activity GO:0003712 IEA:InterPro
|
GO - Biological Process | regulation of transcription by RNA polymerase II GO:0006357 IEA:InterPro
|
Interaction
Repeat regions
Repeats |
>MDP31401
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
4| 1076.61| 245| 252| 398| 648| 1
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154- 385 (209.27/101.59) ....W.......ASS..SKDISKLIDL.......LN..WFRSqdfyfeqlgyGLNELNR.YSGA....KLPNSdiitslevfIKKR..............PQlpsynlistppissEKT...........LEVLK...........DLNLTlmtrmaLI.....NN.LpkrFINNY.EIR....DGRVYFTI......QNEFqVSVTVGNDLIIEQEDD....YYKSP....FYFIDfkflfgINPETALITHKDNKIITKLPKSSFQNLEKIVN..TVlLNSgLGGL.YDL......LHKySISFKL..................YLIARQ...LKD..........ISIN..SKWRNNIQ
398- 648 (413.29/219.97) NY..W.......SSHYLSRNWKSFIELgIDKNYNLNFRWFKN..........GTYELNHGISGI....FDRNN.........IKKQSDASDEQQNNIE..PN..............EES...........LEDLREDnnedeSEPQDLSVD......LI.....LN.I...IVNKHSEML....MDKIYETIVKRLSDQEEY.CSFISCHQLLLKLTPNKSVVFAINPLTGFFYFID......PSPIQNQVTKKINTQSSNHKNKPFFSENDMVE..NI.VNQ.LIQLKLEM......FNK.EINNKLITSGWINNEIIK...LNDYETIKLSNFLNG..........DNFN..NSNYNKIQ
659- 906 (239.07/117.21) WF..L.......SNLVSGDNFRTFW.............WVAR.....iksikGEWK....IQWVqqlkFD..............QEMETSDELTLDYKffNN..............LSSlcsnmiidhmiLEEL...........QTKKIQ......YI.....QK.Q...SKEKAAELLnkfqIDEVKEENIK...PEETN.NPFV..YESIIMLYNDNRLLPVSNSSTSLFLKIK......LITLNNSTQMKLKL.FGNLRNIP....NTLAEtfN........QLNLHIsksqnyF...EINDIVNLSNKINDSSIKetrLLDSILLKL.NVLNElikvlyqldqNNIEivNSSIDSIQ
919- 1105 (214.97/104.58) KLpeMdekfsllSSNTESNEMKLIISY.LNKYLSMTSKVQEN.......eiiGIIKYFKEITPI....V..KT.........IKSVRATLDE.KNKMK..LS...............NG...........LSKLNFD.....VEFQNL..N......LIqfvyfLNhT...NVNSNKKIL....KDKI....VIKLNFMRN...RFNKQDRLLLKLSM...................................KDNLNSRNLKYKKLF......................EL......IYK.GISEVDTTNG...SKITK...LN.YDFIVDSSLIN.........................
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